Gene detail information of Glyur001030s00028210 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56290.1 | 8.00E-55 | |
| NR | KEH35553.1 | 2.61E-97 | hypothetical protein MTR_3g094080 [Medicago truncatula] |
| trEMBL | tr|A0A072V2G7|A0A072V2G7_MEDTR | 1.00E-97 | Uncharacterized protein {ECO:0000313|EMBL:KEH35553.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01030 | 82895 | 84178 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001030s00028210.1 | PF05349.7 | GATA-N | 55 | 119 | 0.00021 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.043 |
| SRR1783600 | control | 0.133 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.006 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.268 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.403 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 193.302 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 192.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.038 |
| SRR2868004 | Drought Stress (root) | 27.627 |
| SRR2967015 | Control (root) | 18.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 371.897 |
| SRR9715740 | Leaf | 668.620 |
| SRR9715741 | Leaf | 300.295 |
| SRR9715739 | Root | 0.241 |
| SRR9715742 | Root | 0.264 |
| SRR9715743 | Root | 0.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.910 |
| SRR8749028 | MeJA induced 9h | 4.346 |
| SRR8749029 | MeJA induced 9h | 1.696 |
| SRR8749030 | Uninduced | 1.252 |
| SRR8749031 | Uninduced | 3.317 |
| SRR8749032 | Uninduced | 3.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.116 |
| SRR8400027 | Control - Root | 1.360 |