Gene detail information of Glyur001030s00028209 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40550.1 | 0 | E2F target gene 1 |
| NR | XP_004502833.1 | 0 | PREDICTED: mini-chromosome maintenance complex-binding protein-like [Cicer arietinum] |
| Swissprot | tr|Q501D5|MCMBP_ARATH | 0 | Mini-chromosome maintenance complex-binding protein |
| trEMBL | tr|A0A072V141|A0A072V141_MEDTR | 0 | Mini-chromosome maintenance complex-binding protein {ECO:0000313|EMBL:KEH35552.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01030 | 76222 | 81054 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001030s00028209.1 | PF09739.4 | MCM_bind | 46 | 167 | 1.20E-32 |
| Glyur001030s00028209.1 | PF13615.1 | Racemase_4 | 324 | 425 | 3.70E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.761 |
| SRR1783600 | control | 9.833 |
| SRR1783602 | moderate drought stress | 5.369 |
| SRR1811619 | moderate drought stress | 5.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.779 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.843 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.762 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.496 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.299 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.480 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.619 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.813 |
| SRR2868004 | Drought Stress (root) | 11.794 |
| SRR2967015 | Control (root) | 11.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.265 |
| SRR9715740 | Leaf | 8.817 |
| SRR9715741 | Leaf | 5.690 |
| SRR9715739 | Root | 4.587 |
| SRR9715742 | Root | 5.595 |
| SRR9715743 | Root | 4.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.209 |
| SRR8749028 | MeJA induced 9h | 24.007 |
| SRR8749029 | MeJA induced 9h | 16.919 |
| SRR8749030 | Uninduced | 4.146 |
| SRR8749031 | Uninduced | 3.654 |
| SRR8749032 | Uninduced | 4.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.981 |
| SRR8400027 | Control - Root | 10.445 |