Gene detail information of Glyur001030s00028203 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05250.1 | 4.00E-38 | |
| NR | XP_004502828.1 | 5.91E-109 | PREDICTED: uncharacterized protein LOC101508249 [Cicer arietinum] |
| trEMBL | tr|A0A072V2F8|A0A072V2F8_MEDTR | 8.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:KEH35543.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01030 | 49571 | 50335 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.646 |
| SRR1783600 | control | 9.344 |
| SRR1783602 | moderate drought stress | 10.784 |
| SRR1811619 | moderate drought stress | 8.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 284.645 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 289.570 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.116 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.259 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 162.930 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 168.701 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 83.258 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 81.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 67.782 |
| SRR2868004 | Drought Stress (root) | 188.592 |
| SRR2967015 | Control (root) | 364.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 59.718 |
| SRR9715740 | Leaf | 106.920 |
| SRR9715741 | Leaf | 96.762 |
| SRR9715739 | Root | 182.710 |
| SRR9715742 | Root | 146.472 |
| SRR9715743 | Root | 167.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.750 |
| SRR8749028 | MeJA induced 9h | 67.011 |
| SRR8749029 | MeJA induced 9h | 15.920 |
| SRR8749030 | Uninduced | 8.886 |
| SRR8749031 | Uninduced | 3.159 |
| SRR8749032 | Uninduced | 8.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 50.319 |
| SRR8400027 | Control - Root | 33.375 |