Gene detail

Gene detail information of Glyur001029s00027002.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G21200.1	2.00E-75	gibberellin 2-oxidase 8
NR	KHN27968.1	2.50E-146	Gibberellin 2-beta-dioxygenase 8 [Glycine soja]
COG	YP_004572412.1	7.00E-23	oxidoreductase [Microlunatus phosphovorus NM-1]
Swissprot	tr\|O49561\|G2OX8_ARATH	1.00E-91	Gibberellin 2-beta-dioxygenase 8
trEMBL	tr\|K7LW84\|K7LW84_SOYBN	9.00E-147	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G34175.2}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01029	78094	80131	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04125	E1.14.11.13	EC:1.14.11.13	Diterpenoid biosynthesis	map00904

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0016491 oxidoreductase activity

GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001029s00027002.1	PF14226.1	DIOX_N	41	131	6.30E-17
Glyur001029s00027002.1	PF03171.15	2OG-FeII_Oxy	146	241	3.80E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.345
SRR1783600	control	2.043
SRR1783602	moderate drought stress	3.783
SRR1811619	moderate drought stress	4.131

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.452
DRR006520	Root Summer glycyrrhizin high producing strain	0.269
DRR006521	Root Winter glycyrrhizin high producing strain	1.770
DRR006522	Root Winter glycyrrhizin high producing strain	1.506
DRR006523	Root Summer glycyrrhizin low producing strain	1.192
DRR006524	Root Summer glycyrrhizin low producing strain	1.114
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.215
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.109

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.426
SRR2868004	Drought Stress (root)	20.961
SRR2967015	Control (root)	19.671

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.077
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.113
SRR9715739	Root	0.650
SRR9715742	Root	0.885
SRR9715743	Root	0.342

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.551
SRR8400027	Control - Root	43.939