Gene detail information of Glyur001026s00034303 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15120.1 | 9.00E-18 | Protein of unknown function (DUF1637) |
| NR | XP_003615158.1 | 2.23E-63 | 2-aminoethanethiol dioxygenase [Medicago truncatula] |
| trEMBL | tr|G7KAG2|G7KAG2_MEDTR | 8.00E-64 | RmlC-type cupin {ECO:0000313|EMBL:AES98116.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01026 | 48338 | 51078 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10712 | ADO | EC:1.13.11.19 | Taurine and hypotaurine metabolism | map00430 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001026s00034303.1 | PF07847.7 | DUF1637 | 44 | 124 | 1.20E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.164 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.282 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 184.304 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 172.513 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.639 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.320 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.395 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.144 |
| SRR9715740 | Leaf | 0.344 |
| SRR9715741 | Leaf | 0.095 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.669 |
| SRR8749028 | MeJA induced 9h | 64.952 |
| SRR8749029 | MeJA induced 9h | 64.640 |
| SRR8749030 | Uninduced | 13.701 |
| SRR8749031 | Uninduced | 47.088 |
| SRR8749032 | Uninduced | 82.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.183 |
| SRR8400027 | Control - Root | 0.565 |