Gene detail information of Glyur001025s00025604 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07120.1 | 4.00E-85 | |
| NR | XP_003544301.2 | 0 | PREDICTED: protein CHUP1, chloroplastic-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9LI74|CHUP1_ARATH | 3.00E-52 | Protein CHUP1, chloroplastic |
| trEMBL | tr|K7M820|K7M820_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37516.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01025 | 69946 | 72402 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.413 |
| SRR1783600 | control | 1.394 |
| SRR1783602 | moderate drought stress | 1.064 |
| SRR1811619 | moderate drought stress | 0.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.446 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.627 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.799 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.802 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.024 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.010 |
| SRR2868004 | Drought Stress (root) | 1.464 |
| SRR2967015 | Control (root) | 1.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.317 |
| SRR9715740 | Leaf | 4.290 |
| SRR9715741 | Leaf | 2.761 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.616 |
| SRR9715743 | Root | 0.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.044 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.046 |
| SRR8400027 | Control - Root | 0.832 |