Gene detail information of Glyur001025s00025594 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51780.1 | 2.00E-53 | BCL-2-associated athanogene 4 |
| NR | XP_006574436.1 | 3.47E-142 | PREDICTED: uncharacterized protein LOC100800041 isoform X1 [Glycine max] |
| Swissprot | tr|Q8RX71|BAG4_ARATH | 6.00E-66 | BAG family molecular chaperone regulator 4 |
| trEMBL | tr|I1JHF6|I1JHF6_SOYBN | 1.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G39440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01025 | 7224 | 10049 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001025s00025594.1 | PF00240.18 | ubiquitin | 54 | 119 | 9.30E-10 |
| Glyur001025s00025594.1 | PF02179.11 | BAG | 145 | 222 | 4.90E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.389 |
| SRR1783600 | control | 12.438 |
| SRR1783602 | moderate drought stress | 8.693 |
| SRR1811619 | moderate drought stress | 7.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.844 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.591 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.486 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.220 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.924 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.011 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.886 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.098 |
| SRR2868004 | Drought Stress (root) | 13.263 |
| SRR2967015 | Control (root) | 13.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.437 |
| SRR9715740 | Leaf | 1.378 |
| SRR9715741 | Leaf | 1.102 |
| SRR9715739 | Root | 3.189 |
| SRR9715742 | Root | 5.967 |
| SRR9715743 | Root | 5.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.278 |
| SRR8400027 | Control - Root | 27.239 |