Gene detail information of Glyur001024s00028112 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006589552.1 | 3.87E-07 | PREDICTED: uncharacterized protein LOC102666265 [Glycine max] |
| trEMBL | tr|E9L556|E9L556_SOYBN | 1.00E-07 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G38160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01024 | 47745 | 52458 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.387 |
| SRR1783600 | control | 1.377 |
| SRR1783602 | moderate drought stress | 1.015 |
| SRR1811619 | moderate drought stress | 1.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.806 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.357 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.056 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.436 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.236 |
| SRR2868004 | Drought Stress (root) | 10.868 |
| SRR2967015 | Control (root) | 8.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.168 |
| SRR9715740 | Leaf | 0.596 |
| SRR9715741 | Leaf | 1.555 |
| SRR9715739 | Root | 1.280 |
| SRR9715742 | Root | 0.195 |
| SRR9715743 | Root | 1.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.516 |
| SRR8749028 | MeJA induced 9h | 9.440 |
| SRR8749029 | MeJA induced 9h | 4.981 |
| SRR8749030 | Uninduced | 3.148 |
| SRR8749031 | Uninduced | 2.473 |
| SRR8749032 | Uninduced | 5.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.322 |
| SRR8400027 | Control - Root | 6.487 |