Gene detail information of Glyur001024s00028109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52200.1 | 1.00E-27 | phosphoprotein phosphatase inhibitors |
| NR | XP_006598709.1 | 1.05E-70 | PREDICTED: uncharacterized protein LOC100500286 isoform X1 [Glycine max] |
| trEMBL | tr|I1MPZ2|I1MPZ2_SOYBN | 4.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G31990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01024 | 39115 | 40891 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001024s00028109.1 | PF04979.9 | IPP-2 | 5 | 135 | 1.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.752 |
| SRR1783600 | control | 3.928 |
| SRR1783602 | moderate drought stress | 1.413 |
| SRR1811619 | moderate drought stress | 1.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.780 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.167 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.452 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.583 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.255 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.578 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.344 |
| SRR2868004 | Drought Stress (root) | 4.347 |
| SRR2967015 | Control (root) | 4.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.879 |
| SRR9715740 | Leaf | 0.230 |
| SRR9715741 | Leaf | 1.290 |
| SRR9715739 | Root | 1.239 |
| SRR9715742 | Root | 2.889 |
| SRR9715743 | Root | 2.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.677 |
| SRR8749028 | MeJA induced 9h | 9.738 |
| SRR8749029 | MeJA induced 9h | 14.871 |
| SRR8749030 | Uninduced | 6.330 |
| SRR8749031 | Uninduced | 5.306 |
| SRR8749032 | Uninduced | 6.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.877 |
| SRR8400027 | Control - Root | 11.963 |