Gene detail information of Glyur001024s00028108 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52190.1 | 1.00E-64 | Sugar isomerase (SIS) family protein |
| NR | XP_004496587.1 | 1.41E-104 | PREDICTED: uncharacterized protein APE_1940.1-like [Cicer arietinum] |
| COG | YP_005441610.1 | 2.00E-41 | putative 6-phospho-3-hexuloisomerase [Caldilinea aerophila DSM 14535 = NBRC 104270] |
| trEMBL | tr|V7BEQ7|V7BEQ7_PHAVU | 6.00E-105 | Uncharacterized protein {ECO:0000313|EMBL:ESW15378.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01024 | 36947 | 37857 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.443 |
| SRR1783600 | control | 1.411 |
| SRR1783602 | moderate drought stress | 2.260 |
| SRR1811619 | moderate drought stress | 2.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.967 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.914 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.949 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.894 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.995 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.908 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.768 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.940 |
| SRR2868004 | Drought Stress (root) | 5.157 |
| SRR2967015 | Control (root) | 1.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.441 |
| SRR9715740 | Leaf | 38.431 |
| SRR9715741 | Leaf | 24.082 |
| SRR9715739 | Root | 1.990 |
| SRR9715742 | Root | 0.121 |
| SRR9715743 | Root | 1.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.967 |
| SRR8749028 | MeJA induced 9h | 6.941 |
| SRR8749029 | MeJA induced 9h | 5.993 |
| SRR8749030 | Uninduced | 3.505 |
| SRR8749031 | Uninduced | 2.443 |
| SRR8749032 | Uninduced | 5.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.529 |
| SRR8400027 | Control - Root | 0.715 |