Gene detail information of Glyur001024s00028107 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52180.1 | 1.00E-83 | |
| NR | XP_004496589.1 | 0 | PREDICTED: uncharacterized protein LOC101504798 [Cicer arietinum] |
| trEMBL | tr|A0A072W093|A0A072W093_MEDTR | 0 | Transmembrane protein 161AB, putative {ECO:0000313|EMBL:KEH43735.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01024 | 32799 | 34193 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001024s00028107.1 | PF10268.4 | Tmemb_161AB | 218 | 406 | 7.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.039 |
| SRR1783600 | control | 19.298 |
| SRR1783602 | moderate drought stress | 12.732 |
| SRR1811619 | moderate drought stress | 12.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.620 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.534 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.427 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.661 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.372 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.145 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.690 |
| SRR2868004 | Drought Stress (root) | 8.734 |
| SRR2967015 | Control (root) | 9.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.710 |
| SRR9715740 | Leaf | 5.941 |
| SRR9715741 | Leaf | 3.825 |
| SRR9715739 | Root | 13.805 |
| SRR9715742 | Root | 10.853 |
| SRR9715743 | Root | 11.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.413 |
| SRR8749028 | MeJA induced 9h | 4.276 |
| SRR8749029 | MeJA induced 9h | 2.252 |
| SRR8749030 | Uninduced | 1.098 |
| SRR8749031 | Uninduced | 0.219 |
| SRR8749032 | Uninduced | 0.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.421 |
| SRR8400027 | Control - Root | 14.066 |