Gene detail information of Glyur001022s00033098 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03170.1 | 6.00E-13 | FASCICLIN-like arabinogalactan-protein 11 |
| NR | XP_003539728.1 | 4.06E-85 | PREDICTED: fasciclin-like arabinogalactan protein 12-like isoform 1 [Glycine max] |
| Swissprot | tr|Q8LEJ6|FLA11_ARATH | 3.00E-19 | Fasciclin-like arabinogalactan protein 11 (Precursor) |
| trEMBL | tr|I1LL68|I1LL68_SOYBN | 3.00E-79 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G20720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01022 | 82094 | 82888 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.959 |
| SRR1783600 | control | 3.094 |
| SRR1783602 | moderate drought stress | 4.371 |
| SRR1811619 | moderate drought stress | 4.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.858 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.221 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.110 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.511 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.802 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.662 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.379 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.170 |
| SRR2868004 | Drought Stress (root) | 5.037 |
| SRR2967015 | Control (root) | 3.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.653 |
| SRR9715740 | Leaf | 0.366 |
| SRR9715741 | Leaf | 0.764 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.944 |
| SRR8749028 | MeJA induced 9h | 2.866 |
| SRR8749029 | MeJA induced 9h | 7.387 |
| SRR8749030 | Uninduced | 3.506 |
| SRR8749031 | Uninduced | 8.069 |
| SRR8749032 | Uninduced | 20.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.195 |
| SRR8400027 | Control - Root | 0.679 |