Gene detail information of Glyur001019s00033953 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH20243.1 | 3.56E-23 | RALF-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072TTQ9|A0A072TTQ9_MEDTR | 1.00E-23 | RALF-like protein {ECO:0000313|EMBL:KEH20243.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01019 | 74020 | 74463 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.882 |
| SRR1783600 | control | 3.089 |
| SRR1783602 | moderate drought stress | 2.352 |
| SRR1811619 | moderate drought stress | 2.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.047 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.029 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.698 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.491 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.385 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.372 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.289 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 121.685 |
| SRR2868004 | Drought Stress (root) | 229.628 |
| SRR2967015 | Control (root) | 211.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.394 |
| SRR9715740 | Leaf | 0.598 |
| SRR9715741 | Leaf | 3.923 |
| SRR9715739 | Root | 0.913 |
| SRR9715742 | Root | 1.660 |
| SRR9715743 | Root | 2.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1118.000 |
| SRR8749028 | MeJA induced 9h | 753.034 |
| SRR8749029 | MeJA induced 9h | 1122.848 |
| SRR8749030 | Uninduced | 2270.975 |
| SRR8749031 | Uninduced | 3207.973 |
| SRR8749032 | Uninduced | 1198.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.885 |
| SRR8400027 | Control - Root | 38.606 |