Gene detail

Gene detail information of Glyur001018s00028945

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G58430.1	9.00E-111	exocyst subunit exo70 family protein B1
NR	XP_004490669.1	0	PREDICTED: uncharacterized protein LOC101500706 isoform X2 [Cicer arietinum]
Swissprot	tr\|Q9FGH9\|E70B1_ARATH	4.00E-127	Exocyst complex component EXO70B1
trEMBL	tr\|G7JZS8\|G7JZS8_MEDTR	0	Exocyst subunit exo70 family protein {ECO:0000313\|EMBL:AES98854.2}

Sequence

Transcript Sequence

>Glyur001018s00028945.1
ATGAGCTACATCGCTTCTGCTTGTAGGTCACGACAGATCCTGGAGCAAATTTTACAAGAATACCCCAAGGTTGCTAACAGAGTGCAAGCATCTTATTCATTCATAGCACAGATAGAGCGGATAATGGTGCTCTTAGAGGGAAGATTGATTGCTAAGTCCAAAAACTACAAGGACCCTCCTTTGTGCTATCTTTTCATGATGAATAATAGGAGCCACATAGAAGCTATGAATAAAATCTGGCTATTGAGAACAATATTTTGCTCATGGAATCAGGTGCTCAACTTCCTGAAGTTGGACAACAATGAGAGGGTGGCACCCAATGACAATGTGACAGCAGCAGAACTGAGAGAGAGAGAAAGGGGAATGGGGCGGCCTGAGAGAGAGAGGAGGGGGGGTTCACGAAGGAGGAGAAGAAAAGAGGAAGAGGAGAGGGAGAAGGCGGAATGGGGGCGGCCTGAGCCGCGCGCCGGTGGCGGCGCCCGCGGCGGTGGCGCCCTGGTCGCGGCCACGCGTCGGGAGGGGAAAGCGAGAGGCCACGGCGTGGCCGCGCTGCCGCTGGCGGTGGTGGACGGCTGGAGGGAGTCGGGTTTCTCCCTTTTGGGAAAGAAAGAAAGAAGATGGCAGCACACAATGAACATTTTCGCAGCATACAGGGACAATAAAAATAGCCGAATATCAGATCAAAGAGATACAAAAAGATGGTTGTTGCAACCAGAGATATGGAGATTTGTGGGCTTTGCTGCGGCTGTTGTAGGACTGCTCTGTTATGCTCTCAGCTCTTCCTTCAACCATCTCTTTGGAGAGTGGAATTTGTTGAAGATATGGAAGGACTCAAGAAGCCACCGGTTCAAAGCCCATGCTGCATTTTTGGTGTTGACCATAACCTCAGTGTATTCCTTTTTCTCCGATAAAGTGATGAATGGGAAACCAGATGCATATAGTCTCGTTTCATGTGCTGCATTTGCCATCATGTCACTTAGCTTGTCAAGGCAAATTCGGTGCGGATTTGAAGTGGATCTCCTATATTTTTTTCTCGGGTGTCTAATTGTGCAACTTATGAAGTTGAAGTTGCAGTTAGGCATTGTTGGAATGGGTTTCAGCTATTTCCTTATTATTCTTCGCTCTTCCTTTTATTCCATATATGAATCGAGTGAAAATCAGCACTACGGACTCCAAGATGATAATTCAGTAGTTATTGAAGTGGTTACTCATACACCACAACTGGCCAGTGTTGATTTTGGCAGTATGATGGAACAGCTCAAGACCTGCGTGGAGGCGTTTCAGCGTGAAAATTCGAATGTCATCGACATGCTTTTGGAGCAGATTAAGGAATACCTTGAAGACCACTCTGAATTGGTGGTGACCGACCACAACTTCATGATCGATGCGCTGCCGCCGGAAACTATCAAAGACGTTCAGGAAACCGTGAATATGATGGTGAGCGCTGGGTTTGAGAAGGACTGCTCCAAGGTGTACAGCAGTTGCCGGAGGGAATGCCTGGAGGAGTGCCTATCCAATAAAATTTTCGGGTTGCAGAAGCTCGGCATCGAGGACGTTCACAATATGCCACTTAAGGACTTGAAGCACGAGATTGAAAGATGGATTAAAGTTTCCAACGTCGCTCTCAAAATATTGTTCCCTAGCGAGCGACGACTCTGCGACCTCGTTTTCTCCTCCTCCGCCACCGACCTCTCCTTCCTGGAGGTTTGCAAGGGATCCGCTATTCAGCTGCTGAGTTTCGTCGATGCCGTCACGGTGGGGAGCCGTTCGCCGGAGCAGTGGTTTAGTATTCTCGACATGTTCGAGACAATGCGTGACTTAATTCCGGTGTTTGAGTCTCTGTTTTGTGATCAGTACAGTGTGTCGCTGAGGAGTGAGGCAATCACAATTTGGAAGAGATTGGGGAAGGCAATCAAGGGGATTTTCATGGAGTTGAGGAATCTGATTCACCGGGATCGGGAGAAGAAGGCGTTGGTCGCCAGTGGCGGGATTCACCCGATTGCCCGCTACGTGATGAACTACCTCCGTGCCGTTTGCCAGTATCGGGGGACCCTGGAGCAAGTGTTTGAAGACTCCTCACTCTCTGTGCAGATGCATTGGGTTATGGAGCAATTGGAGAGCAATTTGGAAGAAAAGTCCAAACTCTACGAGGACCCAGCTTTGGGCTATCTTTTCTTGATCAATAACGTCAAGTACATAGTTCAGATTACCGAAGATAGTGAATTGGGTACACTTTTGGGGAATGAATGGATCCAAACACACACTAGGAAAGTTTCGCAATACTATGGGAACTATGAAAGAACCATGGTGGATTTGCCCCGGTCTGGAAGATATGGTGGGGATGTTCCGCAGTTAAGGGGCGAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01018	59945	76275	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006887 exocytosis

cellular_component
GO:0000145 exocyst

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001018s00028945.1	PF03081.10	Exo70	1	76	7.60E-10
Glyur001018s00028945.1	PF03081.10	Exo70	531	767	1.60E-60
Glyur001018s00028945.2	PF03081.10	Exo70	3	258	6.20E-36

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.387
SRR1783600	control	0.592
SRR1783602	moderate drought stress	1.508
SRR1811619	moderate drought stress	4.656

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.120
DRR006520	Root Summer glycyrrhizin high producing strain	0.264
DRR006521	Root Winter glycyrrhizin high producing strain	0.807
DRR006522	Root Winter glycyrrhizin high producing strain	0.327
DRR006523	Root Summer glycyrrhizin low producing strain	0.124
DRR006524	Root Summer glycyrrhizin low producing strain	0.193
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.300
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.933
SRR2868004	Drought Stress (root)	5.337
SRR2967015	Control (root)	0.472

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.158
SRR9715740	Leaf	2.806
SRR9715741	Leaf	1.286
SRR9715739	Root	2.683
SRR9715742	Root	0.285
SRR9715743	Root	2.021

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.404
SRR8749028	MeJA induced 9h	2.220
SRR8749029	MeJA induced 9h	2.186
SRR8749030	Uninduced	1.951
SRR8749031	Uninduced	1.195
SRR8749032	Uninduced	1.376

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.427
SRR8400027	Control - Root	0.535