Gene detail information of Glyur001018s00028942 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58430.1 | 0 | exocyst subunit exo70 family protein B1 |
| NR | XP_004490667.1 | 0 | PREDICTED: exocyst complex component 7-like [Cicer arietinum] |
| Swissprot | tr|Q9FGH9|E70B1_ARATH | 0 | Exocyst complex component EXO70B1 |
| trEMBL | tr|I1MBG5|I1MBG5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01018 | 44120 | 46069 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001018s00028942.1 | PF03081.10 | Exo70 | 273 | 635 | 1.90E-102 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.604 |
| SRR1783600 | control | 26.398 |
| SRR1783602 | moderate drought stress | 25.753 |
| SRR1811619 | moderate drought stress | 25.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 76.463 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 75.619 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.828 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.707 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 119.897 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 120.083 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.592 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.310 |
| SRR2868004 | Drought Stress (root) | 82.896 |
| SRR2967015 | Control (root) | 110.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 157.220 |
| SRR9715740 | Leaf | 154.165 |
| SRR9715741 | Leaf | 207.024 |
| SRR9715739 | Root | 180.572 |
| SRR9715742 | Root | 210.429 |
| SRR9715743 | Root | 208.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 95.747 |
| SRR8749028 | MeJA induced 9h | 72.048 |
| SRR8749029 | MeJA induced 9h | 71.121 |
| SRR8749030 | Uninduced | 57.002 |
| SRR8749031 | Uninduced | 46.708 |
| SRR8749032 | Uninduced | 63.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 54.476 |
| SRR8400027 | Control - Root | 87.640 |