Gene detail information of Glyur001017s00031778 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25610.1 | 6.00E-94 | C2H2-like zinc finger protein |
| NR | XP_006599567.1 | 0 | PREDICTED: uncharacterized protein LOC100809067 [Glycine max] |
| trEMBL | tr|K7MI40|K7MI40_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G30100.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01017 | 52002 | 59110 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.057 |
| SRR1783600 | control | 2.090 |
| SRR1783602 | moderate drought stress | 1.256 |
| SRR1811619 | moderate drought stress | 1.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.295 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.125 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.614 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.584 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.256 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.907 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.069 |
| SRR2868004 | Drought Stress (root) | 3.224 |
| SRR2967015 | Control (root) | 3.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.192 |
| SRR9715740 | Leaf | 0.632 |
| SRR9715741 | Leaf | 0.931 |
| SRR9715739 | Root | 0.229 |
| SRR9715742 | Root | 2.190 |
| SRR9715743 | Root | 2.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.698 |
| SRR8749028 | MeJA induced 9h | 4.986 |
| SRR8749029 | MeJA induced 9h | 3.450 |
| SRR8749030 | Uninduced | 1.372 |
| SRR8749031 | Uninduced | 1.394 |
| SRR8749032 | Uninduced | 0.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.958 |
| SRR8400027 | Control - Root | 3.224 |