Gene detail

Gene detail information of Glyur001016s00027698

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G71010.1	0	FORMS APLOID AND BINUCLEATE CELLS 1C
NR	XP_004505260.1	0	PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C-like isoform X1 [Cicer arietinum]
COG	NP_147591.2	7.00E-18	thermosome alpha subunit [Aeropyrum pernix K1]
Swissprot	tr\|Q9SSJ8\|FAB1C_ARATH	0	Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
trEMBL	tr\|I1KM34\|I1KM34_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G34030.1}

Sequence

Transcript Sequence

>Glyur001016s00027698.1
GGGCGAGAAAGATGGGTAAGAAGGAAGTGGTGTTGTTAGAGATGCGAGCCTACTCCGGTAGAAAGGGAACCTTCTCCGTACTTCTTCTCTTTCTGCTTTTGATTCTAATTCTTCCCATCATTTGAAGTTTTTTTGCTTCTTTCACAGTTTCTCTCTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTGTTGAGTGATTCAAAGACTTCACCTTTTAGTTTTAAACAAAATGATAAGTTCGTTTTCTATTGAGGGTCTTCGTTCTTTTGTGATTTTACCTGTTGAGCTAATGCTTGAATCGGTTCCTTAATGCAGTCCTGGTGATTTAGGGATCGGTTAGTTTTGTGGGGTCATTAGCATTTGAAAGTTTCGTGCTTTTGTTGCTGGATTTGGAGAAAAAAATTCTAGTTCTTTGTTGTGACATTGAAACGTTGTTCCGTGGGGTCTAGTTGTTATTTTGGTAGGATTTCAGTGTAAATAGTGTCAGATTGGTGAATATTTTCGTCGTTATAGCTATCACTTCCTCCTTTGATGTTATTTGATTCCCAGGAGGATTTGCAATCAACAAAAAGGAAAAAGAGAAAAAACTAAAAAAAGGAAATAATTTATAATTTATAATTTGATTAAAACAATCCCAAACACCCCCCAACTTTTATTGTGGGTTTTACCAATACTCTTCACTTGATATTTTATTTTTAGACAATTTTAGTGATCAGTATTCCAGTGCCAAGGGATAGATTTTTGTTTTTGTTTTTGTTTTTCTGATTTCTTTTGGTTTTGTGGAAGAAAATCCCTATACTGAAGTTAGGTTGTGGAGAAGAAATAGGAGAGTTGAGCTTATTTGCATTGAAGCAGTGGCTGGCTGAGTTCTCTGTTGGGTTATTACATCTTATATGGGAATACCTGATAGTTCACTACTAGATCTAATAGAAAAGGTTAGGTCCTGGGTTTCTTGGGGAGGGAGTGATTTGTCTCGTTTGTCTTACAATTTTGATATGCTCAATAGCAGCTGCAAAATGTGTTGCGAGTGTAATAGAAATTTCAACAAAATGACTCAGCACAAATACAATTGCAAAAGTTGTGGCCGTTGGTTGTGTGGGAAGTGTATCCGAGGTTGTGATCTCCCAAATCTTGAATCTGACAACAGTGAATTCAGGGAAACCATAGGTTCCTGCAAGTTCTGTTCAGGTGCTAATAATAGGATGTGTGAGGGTCAGAGGAAGTGTGTTGAGAAAGTGCACCCTGCTGCCTCTCCACAAGAGAGTCCAAGACAAAGTCCCGAGCCACCTTCACCATGCTTTAGTGTTGAAAGTGAAAGAGTCAGTTCTCCACCAAATACTGAATTGAATCAGGGAAGTCACTTTGAACGCTATTTTCATGATCAGGATTATGGCTATTATCCTCATTCCATGATCAATAGGAGTATGACCAAATCTGGTGCTCACTTTTCTTCAGCATCTACCTTCAGGAGCGATGAAGAAGGGATGGAAGATTCTGGGAAGCACTTTCTCAGCTCATCACGTACATATTGTGATGATTATTCAGATATAGATTCAAGTAGCGTTAGTGCTAGACATGACACTTACAACGATAATTCTGTGGGGTCAAGTCCTTCAGAGAGCCCTTCTAGGATTGATTTTACTTCTAGTAGGGTTGGGCTTCCTATGCAGAAGAAGGGGCAGGAGAAAAGCCCCATCCCTCAGTATGATGTTCCCTTTGGTCAACAAAGTATGGCTGTTTTAAGAAAGCCTGAACAGGGGACTGAGGATGCATACAATACTGCTTGTTTTTCTGATGACTTGTCGATTTTCCGGAACCAGAATGAGAANTCACAGAGGCCATTGGATTTTGAAAACAATGGCCTTATTTGGTTCCCCCCACCACCTGATGATGAAAATGATGATGCAGAAGGTAATTTCTTTGCATATGATGACGACGATGACGATATTGGTGACTCAGGTGCCTTGTTCTCATCCACTAGCAGTCTATCTAATATGTTTCCTGCAAAGGAGAAACATAATGAGGGAAACAAGGAACCTTTAAGAGCTGTCATACAGGGGCATTTTAGAGCTCTTGTTTCACAGCTTTTACAGGGAGAGGGAATTAAAATTGGTAAGGAAAATGATTCTGTAGATTGGCTTGACATAGTTGCAACAGTAGCATGGCAGGCTGCTAACTTTGTGAGACCAGATACTAGCAAAGGTGGCAGTATGGATCCTGGTGANTATGTAAAGGTCAAATGTATAGCAGCTGGAAGCCCAAGTGAGAGCACCCTTATCAAAGGAGTTGTTTGTACAAAAAATATTAAGCATAAGCGCATGACCTCTCAATTCAAAAAACCTAGACTACTCCTCTTAGGAGGAGCATTGGAATATCAGAAAGTTCCAAATCAACTGGCTTCTTTTGATAAATTGTTGCAGCAGGAAAATGATCATCTGAAGATTATCATTTCAAAAATTGAGGCTCTTCGACCAAATGTTTTGCTGGTAGAAAAAAGTGTCGCTTCATGTGCCCAGGAATATTTGCTGGCAAAGGAAATCTCCTTGGTATTGAATGTCAAAAGGCCTTTGCTAGAGCGTATAGCTCGCTGCACTGGTGCTCTTATCACTCCATCAGTGGATTCTTTATCTAAAGCACGATTGGGGAACTGTGAATTGTTCCGGTTAGACCGAATGGTGGAAGATCATGAGACTACTAATCATTTCAACAAAAAGCCATCCAAAACATTAATGTTTTTTGAAGGTTGTCCACGGCGTTTGGGTTGTACGGTCTTACTGAAGGGCACGTGCCGAGAAGAACTTAAAAAAATTAAACATGTTGTGCAATATGCAGTTTTTGCAGCCTATCATTTATCTCTTGAAACCTCATTCCTTGCTGATGAGGGTGCTACCCTACCTAAAATGATAGTAAAACACTCAGCTGACATGCCAGAGAGTGCAACAGCTGACACTGATATTTCTATGATACCTAACACCCTTTCTTCTACCACGTGCCAATCAGAGGCTGATGATACTTCTAGAGCTAAAGACTTTGTTGGTCTTGATTTAAAGACTGAAAATTTGGGATCAGTGTCAGAGCANCTTGATGGCCTTGGCTTTCATTCATATACAGGCACCATGGTGGATTATAATGTTGAGAATGTTCTCTCTGATCCGTACTATAATAACTTAACATCTAATTTGACTGTAGAATTGGATTATTTGCATCAGTGCAATGAATCAGATGGGGACACTATGTCTAGTGCGAGAGACCCTTTGCGAGCAGATTTGCTAGAAACCACGGTTCTAGAGGAGAGGGAGTGTGAAGTTGCTGACTCCACAAAAGACAAGATTAATGAGGATGAATTCTCCGGTGAATACTTTTCTGCCACTGATGGCCATCAGAGCATATTAGTGTACTTTTCCAGTCATTGTGTATCAAAAGGAACTGTATGTGAACGCACTAGGTTGCTGCGCATAAAATTCTATGGCTCTTTTGATAAGCCACTTGGGAGATATCTCCATGATGATCTGTTTGATCAGACATCTTGGTGTCAGTCTTGTAAAGAGCCAGCAGAGTCTCATGTCCTTTGTTTTACACACCAGCAAGGAAATCTTACAATCAATGTTAGGCGCCTTCCCTCCCTGAAGTTACCAGGGGAAAGAGATGGAAAGATTTGGATGTGGCACCGGTGTCTGAGGTGTCCTCTTGTGGATGGAGTTCCACCAGCAACTCGGAGAATTGTTATGTCGGATGCTGCCTGGGGATTGTCTTTTGGAAAGTTCTTGGAACTTAGCTTTTCAAACCATGCAACTGCAAATCGAGTTGCAACCTGTGGACATTCTTTGCAGAGGGACTGCCTCCGTTTTTATGGGTTTGGGAGCATGGTTGCTTTCTTCCGGTATTCCCCTATTGATATTCTTTCTGTCCATCTACCCCCATCTGTACTGGAATTTGGCCACATCCAAGAAGAATGGATTAGAAAGGAGGCAGGAGAGCTTTTTAGTAAAGTGGAAACCTTGTATGTGGAGATATCAGATGTGCTCGAACACTTGGAAACAAAGATTTCATCTCCTGGTATTGGAAATGAGCTGTCAGAGACTTGTGACATTCATAACCACATACTGGATCTGAAAGATATGCTTCGACGAGAAAGAATGGATTATCATGGTTTGCTACAATCAGCCACAGAGACTGCACCACCAGGGAAGATGNCTTTAGACATTCTGGAACTAAATCGCTTGAGACGTTCACTTCTAATTGGTTCACATGTTTGGGATCACCGGCTATACTCATTGGATTCTCTTATTAAAAGAAGTTTTAGTTCCAAGGTTAAACAAGAAAATGAATCAGTTGCACATGTTAATGACTTAAGAACTGACTCACTTCATAAGGATCAAAATTTTGACTTTGGGCTTGAGCAAAATAATTCTCAGCCTCCAAAATTGAAGGAGTCTCATGAAAGTCATATGCTTGTAGAGCCGGATGACCAACTTGAACCTCGTGCTTCAGAAGCACTTACATGTTATCTTGATGGAGAAGAACTGCATTCAGATGGTGAATTTATTGCCAACAAAACATTATCTGAGTGTATCCCACCAAAGGAATCCAATCTTTCTGAAAAAATAGATTCCGCATGGACCGGAACTGATCAACCTGTTCATGCTAACTCTAACTTTATAAGGTTGCCACAACCAATGAGAGTTCATTCTTTTGATTCAGCATTAAGAGTTCAGGAAAGAATCAGGAAAGACTTTTCCGCATCTTTACATCTGTCAACGCTTAGATCTTTTCACGCTTCTGGAGACTACAGGAATATGGTTAGAGACCCTGTCTCCAATGTAACACAAACTCACTTTCAAATGTTGCCGTGGGAGGCGCAGAAGATAAACCTGATTCTAAGCTCCCCGCCATCGTTCATTTCCTCCGTTCCTCGGATTGCTGAAGGTGCTCGGTTGCTGCTTCCCCAAACNTATCGTGGTGATAGAGTTATTGCTGTATATGACAATGATTACTCTAGCATAATATCCTATGCCCTCAGTTCTAAGGAATACGAAGATTGGGTTTCTGGGAAGTCAGATCTGCATGATGGTAGCTGGACTAATCATGAGAGAAACAAAGATGATTTAGCTACTTCCAGCTTTTCTGCATGGGCAACTATGGAGTTGGATTATATAAATTATGGTAGTTATGGGTCTGAAGATGCTCCATCTTCAATTGGCTCTCTTATCAGGGACCCCAAAAAGTCTTTACACTTGCAAATTTCTTTCGGTGATGATTCTTTGGGTGCTGGGGGTAAAGTGAGTTTTTCTGTCACTTGCTATTTCGCAAAGCAGTTTGAATCACTTAGAAAGAAGTGCTGCCCCAATGGAGTTGATTTCGTGCGATCCCTGAGCCGTGGCCGGAGATGGAGTGCACAAGGAGGGAAAAGTAATGTGTATTTTGCCAAGTCGTTAGATGAGAGGTTTATTATTAAACAAGTGACGAAGACGGAATTGGATTCCTTTGAAGAATTTGCACCTCAGTATTTCAAGTACCTGATGGATGCCCTGAACTCAGGAGGCCCAACTTGCCTTGCCAAAATTCTTGGTATTTATCAGGTCACTGTCAAATACCCAAAAGGTGGCAAGGAAACAAAAATAGATCTGATGGTAATGGAGAATCTCTTTTACAAGAGAAACATATCCAGGGTATATGATCTCAAGGGCTCAGAAAGATCTAGGTACAATGCAGATACAACTGGGACAAACAAAGTAATGCTGGACATGAATTTGTTGGAAACATTGAGAACAAAACCCATATTTCTTGGTAGTAGGGCTAAGAGAAGACTCGAGAGAGCTGTATGGAATGACACATCCTTTTTGGCGTCTGTTGATGTTATGGATTATTCGTTGCTGGTTGGGGTGGATGATGAGAGGAAGGAGCTGGTTCTGGGGATTATTGATTTCATGAGACAATACACGTGGGACAAGCATTTGGAGACATGGGTGAAGGCATCTGGGATACTTGGGGGTCCAAAGAATGCTGCCCCCACAATAGTTTCTCCAAAACAATACAAGAAAAGATTCCGGAAGGCCATGACTACCTACTTTCTCACCCTACCTGATCAGTGGTCATCATCCTGAAAAATGTATCCATTGTGTAATTCTTTTCTTAACACAGTGGCAAGGAAGGTACTTCAAAAAAAAAATAAAAAAAAGATGGTTGCCCTTTGTGTTAGACGTGTATCCATGGTCAATACTCCTTTGGATACATCAAGTTGTATTTTTTTTAAAAATTTCATAACATCATATTATAGG

Protein Sequence

>Glyur001016s00027698.1
MGIPDSSLLDLIEKVRSWVSWGGSDLSRLSYNFDMLNSSCKMCCECNRNFNKMTQHKYNCKSCGRWLCGKCIRGCDLPNLESDNSEFRETIGSCKFCSGANNRMCEGQRKCVEKVHPAASPQESPRQSPEPPSPCFSVESERVSSPPNTELNQGSHFERYFHDQDYGYYPHSMINRSMTKSGAHFSSASTFRSDEEGMEDSGKHFLSSSRTYCDDYSDIDSSSVSARHDTYNDNSVGSSPSESPSRIDFTSSRVGLPMQKKGQEKSPIPQYDVPFGQQSMAVLRKPEQGTEDAYNTACFSDDLSIFRNQNEXSQRPLDFENNGLIWFPPPPDDENDDAEGNFFAYDDDDDDIGDSGALFSSTSSLSNMFPAKEKHNEGNKEPLRAVIQGHFRALVSQLLQGEGIKIGKENDSVDWLDIVATVAWQAANFVRPDTSKGGSMDPGXYVKVKCIAAGSPSESTLIKGVVCTKNIKHKRMTSQFKKPRLLLLGGALEYQKVPNQLASFDKLLQQENDHLKIIISKIEALRPNVLLVEKSVASCAQEYLLAKEISLVLNVKRPLLERIARCTGALITPSVDSLSKARLGNCELFRLDRMVEDHETTNHFNKKPSKTLMFFEGCPRRLGCTVLLKGTCREELKKIKHVVQYAVFAAYHLSLETSFLADEGATLPKMIVKHSADMPESATADTDISMIPNTLSSTTCQSEADDTSRAKDFVGLDLKTENLGSVSEXLDGLGFHSYTGTMVDYNVENVLSDPYYNNLTSNLTVELDYLHQCNESDGDTMSSARDPLRADLLETTVLEERECEVADSTKDKINEDEFSGEYFSATDGHQSILVYFSSHCVSKGTVCERTRLLRIKFYGSFDKPLGRYLHDDLFDQTSWCQSCKEPAESHVLCFTHQQGNLTINVRRLPSLKLPGERDGKIWMWHRCLRCPLVDGVPPATRRIVMSDAAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRFYGFGSMVAFFRYSPIDILSVHLPPSVLEFGHIQEEWIRKEAGELFSKVETLYVEISDVLEHLETKISSPGIGNELSETCDIHNHILDLKDMLRRERMDYHGLLQSATETAPPGKMXLDILELNRLRRSLLIGSHVWDHRLYSLDSLIKRSFSSKVKQENESVAHVNDLRTDSLHKDQNFDFGLEQNNSQPPKLKESHESHMLVEPDDQLEPRASEALTCYLDGEELHSDGEFIANKTLSECIPPKESNLSEKIDSAWTGTDQPVHANSNFIRLPQPMRVHSFDSALRVQERIRKDFSASLHLSTLRSFHASGDYRNMVRDPVSNVTQTHFQMLPWEAQKINLILSSPPSFISSVPRIAEGARLLLPQTYRGDRVIAVYDNDYSSIISYALSSKEYEDWVSGKSDLHDGSWTNHERNKDDLATSSFSAWATMELDYINYGSYGSEDAPSSIGSLIRDPKKSLHLQISFGDDSLGAGGKVSFSVTCYFAKQFESLRKKCCPNGVDFVRSLSRGRRWSAQGGKSNVYFAKSLDERFIIKQVTKTELDSFEEFAPQYFKYLMDALNSGGPTCLAKILGIYQVTVKYPKGGKETKIDLMVMENLFYKRNISRVYDLKGSERSRYNADTTGTNKVMLDMNLLETLRTKPIFLGSRAKRRLERAVWNDTSFLASVDVMDYSLLVGVDDERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTIVSPKQYKKRFRKAMTTYFLTLPDQWSSS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01016	40849	48788	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00921	PIKFYVE, FAB1	EC:2.7.1.150	Inositol phosphate metabolism	map00562
			Phosphatidylinositol signaling system	map04070
			Phagosome	map04145
			Regulation of actin cytoskeleton	map04810

Gene Ontology

biological_process
GO:0046488 phosphatidylinositol metabolic process

molecular_function

GO:0005524 ATP binding

GO:0016307 phosphatidylinositol phosphate kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001016s00027698.1	PF00118.19	Cpn60_TCP1	415	654	6.20E-28
Glyur001016s00027698.1	PF01504.13	PIP5K	1497	1726	2.00E-66

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	20.891
SRR1783600	control	21.058
SRR1783602	moderate drought stress	19.034
SRR1811619	moderate drought stress	19.037

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	19.217
DRR006520	Root Summer glycyrrhizin high producing strain	19.033
DRR006521	Root Winter glycyrrhizin high producing strain	18.299
DRR006522	Root Winter glycyrrhizin high producing strain	17.673
DRR006523	Root Summer glycyrrhizin low producing strain	20.841
DRR006524	Root Summer glycyrrhizin low producing strain	20.594
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.812
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.750

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.399
SRR2868004	Drought Stress (root)	43.282
SRR2967015	Control (root)	38.756

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.592
SRR9715740	Leaf	15.643
SRR9715741	Leaf	15.704
SRR9715739	Root	2.204
SRR9715742	Root	18.008
SRR9715743	Root	14.350

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.545
SRR8749028	MeJA induced 9h	26.964
SRR8749029	MeJA induced 9h	19.191
SRR8749030	Uninduced	26.604
SRR8749031	Uninduced	70.162
SRR8749032	Uninduced	44.969

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	31.884
SRR8400027	Control - Root	30.423