Gene detail

Gene detail information of Glyur001015s00035869

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35150.1	1.00E-43	O-methyltransferase family protein
NR	XP_003557042.1	0	PREDICTED: trans-resveratrol di-O-methyltransferase-like [Glycine max]
COG	YP_003370082.1	6.00E-32	O-methyltransferase family 2 [Pirellula staleyi DSM 6068]
Swissprot	tr\|B6VJS4\|ROMT_VITVI	4.00E-143	Trans-resveratrol di-O-methyltransferase
trEMBL	tr\|I1JJX3\|I1JJX3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA0335S00200.1}

Sequence

Transcript Sequence

>Glyur001015s00035869.1
GAAATTAATTACTCTCTTTCTTGGCTTTTAAGTAGATCCAAGTAAGGCAAAATTCCATAAATTAAATCTTGCTAGTATTTCAAGCAACAAATTATGGAATCTCAAAACATAGAACATGTTGTCAAATTACTTCAAGCTCAAAACCACATATGGAATCACATTATGAGGTACACAAAATTCATGTCTCTTAAATGCATAGTTGACTTAGGCATACCAGATATCATACACAATTATGGCCAGCCCATGCCACTCTCAAAACTCATTGGTTCACTACCAATCCATCCATCGAAAACCTGTAACATTTATCGCTTGATGCGATTCATGGTCNACTCTGGCTTTTTCTCTCAGCAGAATGTCACTGAGAATGAGCTAGAAGTCGAATATATGTTGAGTGATACATCCATNCTGTTGCTTAAGAATCATCCCTTGAGTTTGATACCACTCCTATATCTCGNTCTTGATCCATCCCGTATAAATGTAGGGCATCATTTGTCTACTTGGTTCCAAAATAATGATACTACACCATTTGAAACGGCATATGGGATGTTGCATTGGGATTATACTAGGCTTGACCCCATGNTTAACAAATTATTCAATGATGCCATGGAAAACGACACTCGATTTGCTGCANGTGTGGAGATTGAAAAGTGCAAGGGAGTGTTTGATGGATTGAATTCAATTGTTGATGTTGGGGGAGGCACAGGGACCATGGCAAAGGCCATTGCAAAATCATTTCCACAACTGGAGTGTATTGTTTTTGATCTCCCACATGTTGTTGCTGGCTTAAAAGGAAGTGAGAACCTAAAATATGTTGGAGGGGACATGTTTAAAGCAATACCCCCAGCTGATGCCATTTTGTTGAAGTGGATATTGCATGACTGGAATGATGAGGAATGTACGGATATATTGAAGCAATGCCATGAAGCAATAATGAGTAAAGGCAAGAAGGGGAAGGTGATTATCATAGACATTGTGATGGAGAATGAAATAGGGGACAATGAATCAGTGGAAACACAACTCTCCCTTGATATGCTAATGATGATGTTGTTCAATGGAAAGGAGAGAAACAAGAAAGAATGGGTTAAGTTGATTACCTCAGCTGGTTTCACTAACTACAAGATAACTCAAGTCACAGGCTTAAGATCTATCATTGAGATCTATACATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01015	94499	97155	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0008168 methyltransferase activity

GO:0008171 O-methyltransferase activity

GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001015s00035869.1	PF08100.6	Dimerisation	30	78	4.00E-14
Glyur001015s00035869.1	PF00891.13	Methyltransf_2	96	334	6.00E-81

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.138
SRR1811619	moderate drought stress	0.226

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	24.184
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.850

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	28.395
SRR9715740	Leaf	2.265
SRR9715741	Leaf	5.447
SRR9715739	Root	0.003
SRR9715742	Root	0.263
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.015
SRR8400027	Control - Root	0.257