Gene detail information of Glyur001010s00032417 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15490.1 | 3.00E-178 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003546936.1 | 0 | PREDICTED: uncharacterized protein LOC100775895 [Glycine max] |
| COG | YP_006346823.1 | 2.00E-28 | alpha/beta hydrolase [Mesotoga prima MesG1.Ag.4.2] |
| trEMBL | tr|I1MCJ1|I1MCJ1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G01410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01010 | 73760 | 78686 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001010s00032417.1 | PF12697.2 | Abhydrolase_6 | 376 | 612 | 3.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.341 |
| SRR1783600 | control | 2.339 |
| SRR1783602 | moderate drought stress | 2.355 |
| SRR1811619 | moderate drought stress | 2.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.316 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.222 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.914 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.801 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.404 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.281 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.175 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.176 |
| SRR2868004 | Drought Stress (root) | 18.456 |
| SRR2967015 | Control (root) | 17.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.171 |
| SRR9715740 | Leaf | 5.556 |
| SRR9715741 | Leaf | 6.877 |
| SRR9715739 | Root | 4.446 |
| SRR9715742 | Root | 2.948 |
| SRR9715743 | Root | 3.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.355 |
| SRR8749028 | MeJA induced 9h | 15.995 |
| SRR8749029 | MeJA induced 9h | 8.059 |
| SRR8749030 | Uninduced | 34.938 |
| SRR8749031 | Uninduced | 24.978 |
| SRR8749032 | Uninduced | 16.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.137 |
| SRR8400027 | Control - Root | 8.186 |