Gene detail information of Glyur001010s00032411 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11420.1 | 5.00E-147 | Protein of unknown function, DUF642 |
| NR | XP_003597843.1 | 0 | hypothetical protein MTR_2g103170 [Medicago truncatula] |
| trEMBL | tr|G7IMH9|G7IMH9_MEDTR | 0 | Plant/F18G18-200 protein {ECO:0000313|EMBL:AES68094.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01010 | 27393 | 31370 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001010s00032411.1 | PF04862.7 | DUF642 | 24 | 185 | 3.60E-66 |
| Glyur001010s00032411.1 | PF04862.7 | DUF642 | 196 | 363 | 2.80E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.251 |
| SRR1811619 | moderate drought stress | 0.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.090 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.091 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.069 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 140.255 |
| SRR2868004 | Drought Stress (root) | 62.561 |
| SRR2967015 | Control (root) | 72.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.660 |
| SRR9715740 | Leaf | 0.026 |
| SRR9715741 | Leaf | 3.595 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.425 |
| SRR9715743 | Root | 0.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.194 |
| SRR8749029 | MeJA induced 9h | 0.364 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.904 |
| SRR8400027 | Control - Root | 1.767 |