Gene detail information of Glyur001009s00021079 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22850.1 | 0 | Eukaryotic aspartyl protease family protein |
| NR | XP_003540210.1 | 0 | PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] |
| Swissprot | tr|Q9S9K4|ASPL2_ARATH | 1.00E-87 | Aspartic proteinase-like protein 2 (Precursor) |
| trEMBL | tr|I1LTP6|I1LTP6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G30430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01009 | 34317 | 39515 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001009s00021079.1 | PF14543.1 | TAXi_N | 80 | 249 | 3.10E-35 |
| Glyur001009s00021079.1 | PF14541.1 | TAXi_C | 268 | 418 | 4.00E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.708 |
| SRR1783600 | control | 11.602 |
| SRR1783602 | moderate drought stress | 7.986 |
| SRR1811619 | moderate drought stress | 7.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.983 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.204 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.115 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.895 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.011 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.804 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.040 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.310 |
| SRR2868004 | Drought Stress (root) | 72.013 |
| SRR2967015 | Control (root) | 38.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.846 |
| SRR9715740 | Leaf | 13.753 |
| SRR9715741 | Leaf | 30.314 |
| SRR9715739 | Root | 41.823 |
| SRR9715742 | Root | 62.116 |
| SRR9715743 | Root | 53.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.223 |
| SRR8749028 | MeJA induced 9h | 63.842 |
| SRR8749029 | MeJA induced 9h | 58.211 |
| SRR8749030 | Uninduced | 119.696 |
| SRR8749031 | Uninduced | 150.226 |
| SRR8749032 | Uninduced | 119.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.862 |
| SRR8400027 | Control - Root | 42.831 |