Gene detail information of Glyur001009s00021074 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22820.2 | 2.00E-140 | ARM repeat superfamily protein |
| NR | XP_004487545.1 | 0 | PREDICTED: uncharacterized protein LOC101493251 [Cicer arietinum] |
| trEMBL | tr|I1MS78|I1MS78_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01009 | 6554 | 10605 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.839 |
| SRR1783600 | control | 2.860 |
| SRR1783602 | moderate drought stress | 3.558 |
| SRR1811619 | moderate drought stress | 3.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.521 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.904 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.983 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.196 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.020 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.486 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.549 |
| SRR2868004 | Drought Stress (root) | 12.611 |
| SRR2967015 | Control (root) | 13.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.757 |
| SRR9715740 | Leaf | 10.887 |
| SRR9715741 | Leaf | 12.323 |
| SRR9715739 | Root | 7.708 |
| SRR9715742 | Root | 10.294 |
| SRR9715743 | Root | 9.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.973 |
| SRR8749028 | MeJA induced 9h | 3.762 |
| SRR8749029 | MeJA induced 9h | 2.265 |
| SRR8749030 | Uninduced | 1.717 |
| SRR8749031 | Uninduced | 0.626 |
| SRR8749032 | Uninduced | 0.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.664 |
| SRR8400027 | Control - Root | 14.752 |