Gene detail information of Glyur001006s00028651 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK42694.1 | 6.90E-15 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SR02|I3SR02_MEDTR | 3.00E-15 | Uncharacterized protein {ECO:0000313|EMBL:AFK42694.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01006 | 57838 | 58688 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.910 |
| SRR1783600 | control | 2.316 |
| SRR1783602 | moderate drought stress | 1.746 |
| SRR1811619 | moderate drought stress | 1.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.099 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.194 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.756 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.839 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.820 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.579 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.156 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.681 |
| SRR2868004 | Drought Stress (root) | 3.170 |
| SRR2967015 | Control (root) | 2.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.845 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.139 |
| SRR9715739 | Root | 0.691 |
| SRR9715742 | Root | 1.606 |
| SRR9715743 | Root | 1.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.984 |
| SRR8749028 | MeJA induced 9h | 1.952 |
| SRR8749029 | MeJA induced 9h | 0.987 |
| SRR8749030 | Uninduced | 0.936 |
| SRR8749031 | Uninduced | 2.218 |
| SRR8749032 | Uninduced | 1.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.377 |
| SRR8400027 | Control - Root | 5.008 |