Gene detail information of Glyur001006s00028648 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G16290.1 | 4.00E-107 | |
| NR | XP_003532919.1 | 0 | PREDICTED: uncharacterized protein LOC100798065 [Glycine max] |
| COG | YP_002770889.1 | 3.00E-07 | hypothetical protein BBR47_14080 [Brevibacillus brevis NBRC 100599] |
| trEMBL | tr|K7L752|K7L752_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G17591.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01006 | 36110 | 42721 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001006s00028648.1 | PF01464.15 | SLT | 52 | 136 | 2.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.584 |
| SRR1783600 | control | 17.855 |
| SRR1783602 | moderate drought stress | 14.967 |
| SRR1811619 | moderate drought stress | 14.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.540 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.049 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.961 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.008 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.771 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.890 |
| SRR2868004 | Drought Stress (root) | 0.341 |
| SRR2967015 | Control (root) | 0.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.830 |
| SRR9715742 | Root | 4.739 |
| SRR9715743 | Root | 4.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.038 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.051 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.479 |
| SRR8400027 | Control - Root | 10.467 |