Gene detail information of Glyur001005s00027818 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47590.1 | 2.00E-87 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004507939.1 | 5.49E-152 | PREDICTED: uncharacterized protein LOC101493883 isoform X1 [Cicer arietinum] |
| COG | YP_006919685.1 | 2.00E-17 | hydrolase [Thermacetogenium phaeum DSM 12270] |
| trEMBL | tr|K7LYW1|K7LYW1_SOYBN | 8.00E-148 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G16470.8} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01005 | 63913 | 76160 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001005s00027818.1 | PF12695.2 | Abhydrolase_5 | 83 | 257 | 1.10E-10 |
| Glyur001005s00027818.1 | PF12697.2 | Abhydrolase_6 | 316 | 521 | 4.80E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.978 |
| SRR1783600 | control | 10.056 |
| SRR1783602 | moderate drought stress | 7.854 |
| SRR1811619 | moderate drought stress | 8.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.791 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.197 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.712 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.375 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.744 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.795 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.208 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.861 |
| SRR2868004 | Drought Stress (root) | 17.862 |
| SRR2967015 | Control (root) | 18.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.745 |
| SRR9715740 | Leaf | 23.811 |
| SRR9715741 | Leaf | 25.390 |
| SRR9715739 | Root | 7.990 |
| SRR9715742 | Root | 12.442 |
| SRR9715743 | Root | 11.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.938 |
| SRR8749028 | MeJA induced 9h | 8.472 |
| SRR8749029 | MeJA induced 9h | 4.723 |
| SRR8749030 | Uninduced | 4.430 |
| SRR8749031 | Uninduced | 2.494 |
| SRR8749032 | Uninduced | 2.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.305 |
| SRR8400027 | Control - Root | 31.400 |