Gene detail information of Glyur001005s00027816 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09520.1 | 2.00E-14 | exocyst subunit exo70 family protein H4 |
| NR | XP_002534263.1 | 4.29E-24 | Exocyst complex component, putative [Ricinus communis] |
| Swissprot | tr|Q9LZD3|E70A1_ARATH | 5.00E-13 | Exocyst complex component EXO70A1 |
| trEMBL | tr|B9T7P4|B9T7P4_RICCO | 2.00E-24 | Exocyst complex component, putative {ECO:0000313|EMBL:EEF28122.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01005 | 58003 | 58342 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001005s00027816.1 | PF03081.10 | Exo70 | 22 | 86 | 2.00E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.901 |
| SRR1783600 | control | 0.326 |
| SRR1783602 | moderate drought stress | 0.783 |
| SRR1811619 | moderate drought stress | 0.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.351 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.392 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.638 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.265 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.922 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.913 |
| SRR2868004 | Drought Stress (root) | 2.097 |
| SRR2967015 | Control (root) | 2.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.943 |
| SRR9715740 | Leaf | 1.853 |
| SRR9715741 | Leaf | 0.880 |
| SRR9715739 | Root | 0.081 |
| SRR9715742 | Root | 1.024 |
| SRR9715743 | Root | 2.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.024 |
| SRR8749028 | MeJA induced 9h | 1.403 |
| SRR8749029 | MeJA induced 9h | 1.043 |
| SRR8749030 | Uninduced | 0.085 |
| SRR8749031 | Uninduced | 0.124 |
| SRR8749032 | Uninduced | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.198 |
| SRR8400027 | Control - Root | 4.343 |