Gene detail information of Glyur001005s00027812 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26110.1 | 7.00E-25 | Protein of unknown function (DUF761) |
| NR | XP_007154654.1 | 1.19E-66 | hypothetical protein PHAVU_003G136600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C952|V7C952_PHAVU | 4.00E-67 | Uncharacterized protein {ECO:0000313|EMBL:ESW26649.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01005 | 30183 | 30923 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001005s00027812.1 | PF14364.1 | DUF4408 | 6 | 34 | 2.70E-09 |
| Glyur001005s00027812.1 | PF05553.6 | DUF761 | 214 | 244 | 1.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 243.652 |
| SRR1783600 | control | 244.269 |
| SRR1783602 | moderate drought stress | 315.407 |
| SRR1811619 | moderate drought stress | 311.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 289.467 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 281.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.884 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 46.375 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 167.322 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 161.745 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 94.135 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 93.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.308 |
| SRR2868004 | Drought Stress (root) | 53.294 |
| SRR2967015 | Control (root) | 74.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.097 |
| SRR9715740 | Leaf | 37.954 |
| SRR9715741 | Leaf | 65.787 |
| SRR9715739 | Root | 266.399 |
| SRR9715742 | Root | 122.468 |
| SRR9715743 | Root | 163.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.001 |
| SRR8749028 | MeJA induced 9h | 12.782 |
| SRR8749029 | MeJA induced 9h | 12.980 |
| SRR8749030 | Uninduced | 1.628 |
| SRR8749031 | Uninduced | 0.109 |
| SRR8749032 | Uninduced | 0.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 140.723 |
| SRR8400027 | Control - Root | 157.864 |