Gene detail information of Glyur001004s00040447 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004513903.1 | 1.37E-45 | PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Cicer arietinum] |
| trEMBL | tr|V7AK46|V7AK46_PHAVU | 5.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:ESW05914.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01004 | 63641 | 67772 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.319 |
| SRR1783600 | control | 0.339 |
| SRR1783602 | moderate drought stress | 0.260 |
| SRR1811619 | moderate drought stress | 0.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.070 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.138 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.317 |
| SRR2868004 | Drought Stress (root) | 4.124 |
| SRR2967015 | Control (root) | 1.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.303 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.474 |
| SRR9715739 | Root | 0.032 |
| SRR9715742 | Root | 2.212 |
| SRR9715743 | Root | 2.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 56.534 |
| SRR8749028 | MeJA induced 9h | 39.606 |
| SRR8749029 | MeJA induced 9h | 121.433 |
| SRR8749030 | Uninduced | 104.642 |
| SRR8749031 | Uninduced | 245.676 |
| SRR8749032 | Uninduced | 82.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.326 |
| SRR8400027 | Control - Root | 3.974 |