Gene detail information of Glyur001002s00038919 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62550.1 | 1.00E-13 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_004495667.1 | 1.34E-39 | PREDICTED: universal stress protein A-like protein-like [Cicer arietinum] |
| COG | YP_004968658.1 | 1.00E-08 | universal stress protein UspA-like protein [Desulfosporosinus orientis DSM 765] |
| Swissprot | tr|Q8LGG8|USPAL_ARATH | 6.00E-10 | Universal stress protein A-like protein |
| trEMBL | tr|C6SVT0|C6SVT0_SOYBN | 2.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G28900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01002 | 71384 | 74942 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001002s00038919.1 | PF00582.21 | Usp | 3 | 23 | 5.30E-05 |
| Glyur001002s00038919.1 | PF00582.21 | Usp | 72 | 126 | 1.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.207 |
| SRR1783600 | control | 0.100 |
| SRR1783602 | moderate drought stress | 0.375 |
| SRR1811619 | moderate drought stress | 0.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.537 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.294 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.736 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.513 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.350 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.092 |
| SRR2967015 | Control (root) | 0.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.041 |
| SRR9715740 | Leaf | 0.039 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.076 |
| SRR9715743 | Root | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.024 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.136 |
| SRR8400027 | Control - Root | 0.033 |