Gene detail information of Glyur001001s00027977 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004511455.1 | 4.04E-11 | PREDICTED: uncharacterized protein LOC101512373 [Cicer arietinum] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01001 | 15455 | 19010 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.475 |
| SRR1783600 | control | 6.048 |
| SRR1783602 | moderate drought stress | 5.962 |
| SRR1811619 | moderate drought stress | 6.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.749 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.525 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.699 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.793 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.884 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.770 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.402 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.370 |
| SRR2868004 | Drought Stress (root) | 1.015 |
| SRR2967015 | Control (root) | 0.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.117 |
| SRR9715740 | Leaf | 0.065 |
| SRR9715741 | Leaf | 0.274 |
| SRR9715739 | Root | 0.203 |
| SRR9715742 | Root | 0.238 |
| SRR9715743 | Root | 0.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.138 |
| SRR8749028 | MeJA induced 9h | 0.068 |
| SRR8749029 | MeJA induced 9h | 0.032 |
| SRR8749030 | Uninduced | 0.018 |
| SRR8749031 | Uninduced | 0.028 |
| SRR8749032 | Uninduced | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.207 |
| SRR8400027 | Control - Root | 0.361 |