Gene detail information of Glyur001000s00030119 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13860.1 | 1.00E-05 | ELCH-like |
| NR | XP_007131605.1 | 2.41E-10 | hypothetical protein PHAVU_011G027400g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FFY6|ELCL_ARATH | 2.00E-06 | Protein ELC-like |
| trEMBL | tr|V7ADM1|V7ADM1_PHAVU | 9.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:ESW03599.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01000 | 35098 | 36164 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.251 |
| SRR1783600 | control | 0.510 |
| SRR1783602 | moderate drought stress | 0.131 |
| SRR1811619 | moderate drought stress | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.507 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.826 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.575 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.224 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.230 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.051 |
| SRR2868004 | Drought Stress (root) | 0.320 |
| SRR2967015 | Control (root) | 0.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.022 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.010 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.068 |
| SRR8749028 | MeJA induced 9h | 6.470 |
| SRR8749029 | MeJA induced 9h | 4.236 |
| SRR8749030 | Uninduced | 2.640 |
| SRR8749031 | Uninduced | 1.376 |
| SRR8749032 | Uninduced | 4.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.468 |
| SRR8400027 | Control - Root | 0.026 |