Gene detail information of Glyur000999s00024097 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G09960.1 | 2.00E-23 | |
| NR | XP_007137592.1 | 6.80E-47 | hypothetical protein PHAVU_009G139200g [Phaseolus vulgaris] |
| trEMBL | tr|V7AZC3|V7AZC3_PHAVU | 3.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:ESW09586.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00999 | 62123 | 67671 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.006 |
| SRR1783600 | control | 34.958 |
| SRR1783602 | moderate drought stress | 31.358 |
| SRR1811619 | moderate drought stress | 31.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.313 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.865 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 53.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 82.133 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 80.707 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.547 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.169 |
| SRR2868004 | Drought Stress (root) | 22.120 |
| SRR2967015 | Control (root) | 21.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.594 |
| SRR9715740 | Leaf | 24.477 |
| SRR9715741 | Leaf | 21.883 |
| SRR9715739 | Root | 5.767 |
| SRR9715742 | Root | 12.769 |
| SRR9715743 | Root | 11.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.449 |
| SRR8749028 | MeJA induced 9h | 43.659 |
| SRR8749029 | MeJA induced 9h | 60.745 |
| SRR8749030 | Uninduced | 125.461 |
| SRR8749031 | Uninduced | 69.859 |
| SRR8749032 | Uninduced | 97.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.309 |
| SRR8400027 | Control - Root | 13.263 |