Gene detail information of Glyur000998s00022999 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26240.1 | 2.00E-61 | |
| NR | KHN16668.1 | 2.67E-111 | hypothetical protein glysoja_002765 [Glycine soja] |
| trEMBL | tr|I1K624|I1K624_SOYBN | 2.00E-111 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G36150.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00998 | 62910 | 65772 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.100 |
| SRR1783600 | control | 7.107 |
| SRR1783602 | moderate drought stress | 7.397 |
| SRR1811619 | moderate drought stress | 6.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.183 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.506 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.388 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.372 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.611 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.897 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.412 |
| SRR2868004 | Drought Stress (root) | 22.748 |
| SRR2967015 | Control (root) | 23.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.228 |
| SRR9715740 | Leaf | 19.789 |
| SRR9715741 | Leaf | 20.720 |
| SRR9715739 | Root | 3.188 |
| SRR9715742 | Root | 6.294 |
| SRR9715743 | Root | 5.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.483 |
| SRR8749028 | MeJA induced 9h | 7.568 |
| SRR8749029 | MeJA induced 9h | 7.817 |
| SRR8749030 | Uninduced | 11.544 |
| SRR8749031 | Uninduced | 8.628 |
| SRR8749032 | Uninduced | 7.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.614 |
| SRR8400027 | Control - Root | 19.782 |