Gene detail

Gene detail information of Glyur000998s00022993

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G35720.1	2.00E-128	DNAJ heat shock N-terminal domain-containing protein
NR	XP_003517424.1	0	PREDICTED: chaperone protein dnaJ 13-like [Glycine max]
COG	YP_004627084.1	5.00E-11	Chaperone protein dnaJ [Thermodesulfobacterium geofontis OPF15]
Swissprot	tr\|Q39079\|DNJ13_ARATH	4.00E-158	Chaperone protein dnaJ 13
trEMBL	tr\|I1J9W3\|I1J9W3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G41850.1}

Sequence

Transcript Sequence

>Glyur000998s00022993.1
ATGGAGCAACAGAACGAAGCGCCAGACAACAGAGAACTCTACGCACTCTTCAACTTGTCCCCTGAAGCTTCCTATGAAGAAATTCGCAANGCTTATCGTCAATGGGCACAAGTCTATCACCCTGACAAGTGCCAATCCCCTCACATGAAAGAAACTGCTACGGACAGCTTTCAACGCGTGCGTGAAGCGTNTGAGATTTTGTCAGATCCAAAGACAAGGCTAATATATGATATCTACGGCATGGAAGGGTTGACCTCTGATTTGGAATCTGGTTTGGAATTTCGTCCGAGGCTGGATGAAGCCGCCGTGGAGATGAAGACTAAACCAGCTCTGGAAGCAGAGCTGGAGAGGCTGATGAGATTGATGGAAAGGGAAAAGAATATATTGAGGGAAAGGGAAAAGATTGCGGGGCATATTCGATCCTCGGATACAGTTCTGGCCAATATGTCTTTGCCACACTATCTAGATGGTGATGGCCTCTTCAGAGGAATGGCTATGACAACTGAAATCCAGGCTCAGTTATCGAAGCGAAATGCCTTTACAATTGGTGTTGATGGACATGAAGGTGCTGTTTCTGCCGTATTTGGGCATCAAATTTCGGAAGTTTCATCAGTAGAATTTATGGCTTCAGCTGGTTTACGTGCACTAAATCTAATTGGGGTGCAAACGTCTCGTAAGCTATCATCACACTCAGCTGCAACAATGGGCTTAGCAATGTCGTTGAAAGATGGTTCATGGAATCTTTCAAATTTATGGACCCGCCAACTGTCNGAAACAGCAGGTGGACATTTTGGCACAGGTTCTTTTGAGACATCAGTTCATTATACTCATCGTTTTTCTTCTAAATCTCTTGGCTGCATTGCGGGNAAAGTTGGGAGTTCTTCCCTTGAGATTGAAGTCGGTGGCGAGAGGAAGTTATCCAAATACAGCGGTGTGCGTTGGTTGTATATAATAGGAATTCAGGGTATTTCCTGGAAATTTGAACTCTATTGCGGTGGTCAGAAGTTAATCATTCCTATTTTTCTAACGAGGCATTTGAACCCTGNCTTTGCTACTGGAGCATTAGTTGTTCCAGCATCTCTTTACTTTGTTTTAAAGAGCATGTGGATCAGCAGGATAAAATTTATTGAACACAAAGACAATAATACTTCTGGGAACTTTTCACTGATGAATTCAATCACGTCAGCTGTACCATTGGTTACAAAGAAATTTGTTATTAAACCATATTACCTTAAAAGGAATAAGCAGAAGGCTCTAGAGAAGGAAGAGAAAACTTGTTCTCAGGTTCAAGAAGCAAGGGCTGCAGCAGAGAAAGATAAGAAATTACAGAAAAATGTGGCTAATTGGAAAAGAACCAGGCAATTAGAAACAGGCGGACTGGTTCATGAAGGTATAAAAAAATCAAGAATCATGGGATTTTATGATACTTGTCCAGGAGAACCTAAACAGTTGTATGTAGAGTACGCTTATGCTGGTAATCAACACAAGGTATTAACAGTTGCTCTTGTATTGGTTGGTGATTATGAAGAATTACTGATACCCCAGGGCACCCACAGGAATCATGAAATTTTATGATACTTGCAGGTCTCGAACACCAGCTGTGGAATGGGTATGAGAATTCTGTGCATTTAGCTGTTGACNAGTGTCATGATTGTAGCTTAACAACTCCACCAGGTGTTCCAAATCCAAGTCAACGGACCTAAAGACATGAGCAATTTGGGCCATCCATATAGACCAAACTATAGCATACCAGATCACTCGCCACAACTTTTGTTTCTCTGATACACTTCAATTTTAAAGGAGTTGAATCCTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00998	28962	36941	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000998s00022993.1	PF00226.26	DnaJ	12	77	2.20E-18
Glyur000998s00022993.1	PF11875.3	DUF3395	462	498	9.00E-07
Glyur000998s00022993.2	PF00226.26	DnaJ	12	77	2.10E-18
Glyur000998s00022993.2	PF11875.3	DUF3395	463	508	1.50E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.290
SRR1783600	control	0.330
SRR1783602	moderate drought stress	0.210
SRR1811619	moderate drought stress	0.123

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.289
DRR006520	Root Summer glycyrrhizin high producing strain	0.101
DRR006521	Root Winter glycyrrhizin high producing strain	0.710
DRR006522	Root Winter glycyrrhizin high producing strain	0.669
DRR006523	Root Summer glycyrrhizin low producing strain	0.316
DRR006524	Root Summer glycyrrhizin low producing strain	0.372
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.267
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.408

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.277
SRR2868004	Drought Stress (root)	1.869
SRR2967015	Control (root)	0.819

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.608
SRR9715740	Leaf	0.170
SRR9715741	Leaf	1.141
SRR9715739	Root	0.000
SRR9715742	Root	1.376
SRR9715743	Root	1.018

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.464
SRR8749028	MeJA induced 9h	18.305
SRR8749029	MeJA induced 9h	15.127
SRR8749030	Uninduced	2.976
SRR8749031	Uninduced	2.003
SRR8749032	Uninduced	2.997

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.394
SRR8400027	Control - Root	1.572