Gene detail

Gene detail information of Glyur000998s00022992.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G26220.1	1.00E-67	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NR	KHM99836.1	3.48E-134	Putative caffeoyl-CoA O-methyltransferase [Glycine soja]
COG	NP_489219.1	4.00E-59	O-methyltransferase [Nostoc sp. PCC 7120]
Swissprot	tr\|Q9C5D7\|CAMT3_ARATH	2.00E-108	Probable caffeoyl-CoA O-methyltransferase At4g26220
trEMBL	tr\|I1K629\|I1K629_SOYBN	1.00E-134	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G36210.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00998	23753	25250	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00588	E2.1.1.104	EC:2.1.1.104	Phenylalanine metabolism	map00360
			Phenylpropanoid biosynthesis	map00940
			Stilbenoid, diarylheptanoid and gingerol biosynthesis	map00945
			Flavonoid biosynthesis	map00941

Gene Ontology

molecular_function
GO:0008171 O-methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000998s00022992.1	PF01596.12	Methyltransf_3	27	236	2.40E-79

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.105
SRR1811619	moderate drought stress	0.066

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.150
DRR006520	Root Summer glycyrrhizin high producing strain	0.143
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.573
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.447

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.102
SRR2868004	Drought Stress (root)	0.190
SRR2967015	Control (root)	0.059

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.093
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.086

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.382
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.912
SRR8749030	Uninduced	0.550
SRR8749031	Uninduced	0.941
SRR8749032	Uninduced	1.462

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.059
SRR8400027	Control - Root	0.000