Gene detail

Gene detail information of Glyur000997s00033155.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G18890.1	1.00E-106	Protein kinase superfamily protein
NR	KHN45232.1	1.82E-175	Putative receptor-like serine/threonine-protein kinase [Glycine soja]
COG	YP_005068728.1	4.00E-16	serine/threonine protein kinase [Arthrospira platensis NIES-39]
Swissprot	tr\|Q5XF57\|Y5576_ARATH	4.00E-88	Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBL	tr\|I1L196\|I1L196_SOYBN	1.00E-175	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G06160.1}

Sequence

Transcript Sequence

>Glyur000997s00033155.1
ATGAAGTATATTCGTAGCAACAGCTTGAAGAGGCTCTTCTCATTTGGAAGACGCAGTNTTGGGGGAGAAGAAGAAAACGACGAGAGCGTGGTTGTGGTTCTTCCACAACAACACCCTCCAACAAGACCCTCTTGGAAATGCTTCTCTTATGAAGANTTGTTCCATGCCACCAANGGTTTCAGCTCAGGAAATCTGGTTGGGAAAGGAGGGTATGCAGAGGTTTACAAGGGAAGACTGAAGGGTGGTAGTGGTGGTGGTGACATTGCTGTGAAGAGGCTCACGAGAACAACTTCATCAAGTGATGAGAGGAAGGAGAAGGAGTTTCTAACAGAGATTGGTACAATTGGTCATGTGTACCATCCCAACGTTTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTTTCCACCATTGGCTCTGTTGCTTCTCTCATTCACGATGAGAAAAAGCCTCCTCTTGATTGGAAAACAAGGTACAAGATAGCTCTTGGGACTGCACGTGGCCTCCACTATTTGCACAAAGGGTGCCAGAGGAGGATAATCCATAGGGACATCAAGGCCTCAAACATTCTTTTGACTGGAGATTTTGAGCCAAAGATATCCGATTTTGGATTAGCAAAGTGGCTTCCATCTCAGTGGACTCATCATTCAATAGCCCCAATAGAAGGGACATTTGGTGTTGTTGCTAGAAGTCATCTCTGGGAAGAAACCTGTGGATGGATCTCACCAAAGCTTGCACAGCTGGGGGAGATGGAGAAGTTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACTCAGTTTAGTAGACTTGCCTTTGCTGCCTCCTTGTGCATCCGGGCATCTTCAACTTGGCGACCTACCATGAGCGAGGTATTAGAGGTAATAGAGGAGGGGGAGATGGATAAAGAGAAGTGGAATATGCCAGAGGAAGAAGAGCAAGAAGAAGAATTATGGGGTTTTGATGATCTGGAATATGCATATGACAGTTCCTCTTCAATGTCTCTACCTAACTCCATTGAAAGTACTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00997	33326	37792	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.10.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04733	IRAK4	EC:2.7.11.1	NF-kappa B signaling pathway	map04064
			Toll-like receptor signaling pathway	map04620
			Toll and Imd signaling pathway	map04624
			NOD-like receptor signaling pathway	map04621
			Neurotrophin signaling pathway	map04722
			Pertussis	map05133
			Tuberculosis	map05152
			Measles	map05162
			Influenza A	map05164
			Toxoplasmosis	map05145
			Leishmaniasis	map05140
			Chagas disease (American trypanosomiasis)	map05142

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000997s00033155.1	PF07714.12	Pkinase_Tyr	63	215	1.50E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.797
SRR1783600	control	1.606
SRR1783602	moderate drought stress	0.659
SRR1811619	moderate drought stress	0.633

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.087
DRR006520	Root Summer glycyrrhizin high producing strain	0.101
DRR006521	Root Winter glycyrrhizin high producing strain	0.179
DRR006522	Root Winter glycyrrhizin high producing strain	0.206
DRR006523	Root Summer glycyrrhizin low producing strain	0.313
DRR006524	Root Summer glycyrrhizin low producing strain	0.409
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.351
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.404

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.587
SRR2868004	Drought Stress (root)	9.275
SRR2967015	Control (root)	6.073

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.871
SRR9715740	Leaf	0.111
SRR9715741	Leaf	0.441
SRR9715739	Root	2.177
SRR9715742	Root	1.228
SRR9715743	Root	2.163

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.135
SRR8749028	MeJA induced 9h	0.014
SRR8749029	MeJA induced 9h	0.038
SRR8749030	Uninduced	0.278
SRR8749031	Uninduced	0.145
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.063
SRR8400027	Control - Root	8.750