Gene detail information of Glyur000994s00025822 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61215.1 | 8.00E-75 | bromodomain 4 |
| NR | XP_004504999.1 | 0 | PREDICTED: uncharacterized protein LOC101514166 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1MEC5|I1MEC5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00994 | 9936 | 15230 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000994s00025822.1 | PF00439.20 | Bromodomain | 271 | 351 | 3.60E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.109 |
| SRR1783600 | control | 9.309 |
| SRR1783602 | moderate drought stress | 17.024 |
| SRR1811619 | moderate drought stress | 16.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.299 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.393 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.782 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.205 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.686 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.816 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.152 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.750 |
| SRR2868004 | Drought Stress (root) | 25.595 |
| SRR2967015 | Control (root) | 30.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.537 |
| SRR9715740 | Leaf | 9.882 |
| SRR9715741 | Leaf | 12.717 |
| SRR9715739 | Root | 3.344 |
| SRR9715742 | Root | 10.494 |
| SRR9715743 | Root | 9.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.753 |
| SRR8749028 | MeJA induced 9h | 54.033 |
| SRR8749029 | MeJA induced 9h | 99.165 |
| SRR8749030 | Uninduced | 35.426 |
| SRR8749031 | Uninduced | 67.469 |
| SRR8749032 | Uninduced | 84.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.283 |
| SRR8400027 | Control - Root | 25.189 |