Gene detail information of Glyur000993s00027663 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36650.1 | 3.00E-23 | |
| NR | XP_003542575.1 | 5.53E-155 | PREDICTED: protein CHUP1, chloroplastic-like [Glycine max] |
| trEMBL | tr|I1LZC9|I1LZC9_SOYBN | 2.00E-155 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G21220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00993 | 61068 | 62384 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.414 |
| SRR1783600 | control | 0.361 |
| SRR1783602 | moderate drought stress | 1.748 |
| SRR1811619 | moderate drought stress | 1.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.627 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.362 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.169 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.165 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.874 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.417 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.246 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.235 |
| SRR2868004 | Drought Stress (root) | 4.984 |
| SRR2967015 | Control (root) | 7.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.339 |
| SRR9715740 | Leaf | 8.925 |
| SRR9715741 | Leaf | 9.418 |
| SRR9715739 | Root | 0.440 |
| SRR9715742 | Root | 4.499 |
| SRR9715743 | Root | 3.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.216 |
| SRR8749028 | MeJA induced 9h | 0.423 |
| SRR8749029 | MeJA induced 9h | 0.046 |
| SRR8749030 | Uninduced | 0.990 |
| SRR8749031 | Uninduced | 0.215 |
| SRR8749032 | Uninduced | 0.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.919 |
| SRR8400027 | Control - Root | 3.020 |