Gene detail information of Glyur000992s00036046 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41040.1 | 2.00E-124 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004488470.1 | 0 | PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic-like [Cicer arietinum] |
| COG | YP_003267998.1 | 8.00E-24 | type 11 methyltransferase [Haliangium ochraceum DSM 14365] |
| Swissprot | tr|Q0WPT7|Y2104_ARATH | 5.00E-163 | Uncharacterized methyltransferase At2g41040, chloroplastic (Precursor) |
| trEMBL | tr|B7FIK4|B7FIK4_MEDTR | 0 | S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:KEH37883.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00992 | 14416 | 20011 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000992s00036046.1 | PF08241.7 | Methyltransf_11 | 184 | 284 | 4.60E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.176 |
| SRR1783600 | control | 18.096 |
| SRR1783602 | moderate drought stress | 19.254 |
| SRR1811619 | moderate drought stress | 18.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.297 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.002 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.524 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.829 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.449 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.362 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 63.228 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.829 |
| SRR2868004 | Drought Stress (root) | 21.975 |
| SRR2967015 | Control (root) | 20.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.729 |
| SRR9715740 | Leaf | 61.657 |
| SRR9715741 | Leaf | 49.237 |
| SRR9715739 | Root | 7.106 |
| SRR9715742 | Root | 7.333 |
| SRR9715743 | Root | 7.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.076 |
| SRR8749028 | MeJA induced 9h | 16.015 |
| SRR8749029 | MeJA induced 9h | 12.345 |
| SRR8749030 | Uninduced | 14.248 |
| SRR8749031 | Uninduced | 9.415 |
| SRR8749032 | Uninduced | 12.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.269 |
| SRR8400027 | Control - Root | 19.661 |