Gene detail information of Glyur000990s00032250 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37770.2 | 8.00E-96 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | XP_007134067.1 | 1.83E-140 | hypothetical protein PHAVU_010G016700g [Phaseolus vulgaris] |
| COG | YP_007469167.1 | 2.00E-63 | aldo/keto reductase, diketogulonate reductase [Desulfocapsa sulfexigens DSM 10523] |
| Swissprot | tr|Q84TF0|AKRCA_ARATH | 2.00E-132 | Aldo-keto reductase family 4 member C10 |
| trEMBL | tr|V7APB9|V7APB9_PHAVU | 7.00E-141 | Uncharacterized protein {ECO:0000313|EMBL:ESW06061.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00990 | 84084 | 86560 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000990s00032250.1 | PF00248.16 | Aldo_ket_red | 19 | 271 | 2.20E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.561 |
| SRR1783600 | control | 0.975 |
| SRR1783602 | moderate drought stress | 0.059 |
| SRR1811619 | moderate drought stress | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.375 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.175 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.120 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.248 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.370 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.287 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.189 |
| SRR2868004 | Drought Stress (root) | 7.437 |
| SRR2967015 | Control (root) | 2.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.749 |
| SRR9715740 | Leaf | 0.219 |
| SRR9715741 | Leaf | 1.787 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.002 |
| SRR9715743 | Root | 0.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.079 |
| SRR8749028 | MeJA induced 9h | 0.935 |
| SRR8749029 | MeJA induced 9h | 1.304 |
| SRR8749030 | Uninduced | 0.937 |
| SRR8749031 | Uninduced | 11.245 |
| SRR8749032 | Uninduced | 3.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.210 |
| SRR8400027 | Control - Root | 0.356 |