Gene detail information of Glyur000990s00032246 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02090.1 | 2.00E-07 | |
| NR | NP_001235013.1 | 1.01E-28 | uncharacterized protein LOC100305924 [Glycine max] |
| trEMBL | tr|C6SX69|C6SX69_SOYBN | 4.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G24880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00990 | 60543 | 60794 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.619 |
| SRR1783600 | control | 16.280 |
| SRR1783602 | moderate drought stress | 6.019 |
| SRR1811619 | moderate drought stress | 5.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.738 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.494 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.280 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.432 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.596 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.758 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.878 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.124 |
| SRR2868004 | Drought Stress (root) | 45.135 |
| SRR2967015 | Control (root) | 47.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.265 |
| SRR9715740 | Leaf | 0.086 |
| SRR9715741 | Leaf | 0.608 |
| SRR9715739 | Root | 3.563 |
| SRR9715742 | Root | 7.860 |
| SRR9715743 | Root | 3.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.219 |
| SRR8749028 | MeJA induced 9h | 22.504 |
| SRR8749029 | MeJA induced 9h | 5.425 |
| SRR8749030 | Uninduced | 2.943 |
| SRR8749031 | Uninduced | 6.051 |
| SRR8749032 | Uninduced | 6.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.788 |
| SRR8400027 | Control - Root | 26.372 |