Gene detail information of Glyur000989s00020264 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67840.1 | 7.00E-88 | chloroplast sensor kinase |
| NR | XP_004504127.1 | 8.22E-156 | PREDICTED: uncharacterized protein LOC101499283 [Cicer arietinum] |
| trEMBL | tr|A0A072U4L7|A0A072U4L7_MEDTR | 1.00E-150 | Sensor kinase {ECO:0000313|EMBL:KEH20770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00989 | 61393 | 65977 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000989s00020264.1 | PF02518.21 | HATPase_c | 133 | 253 | 9.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.773 |
| SRR1783600 | control | 16.621 |
| SRR1783602 | moderate drought stress | 17.560 |
| SRR1811619 | moderate drought stress | 17.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.857 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.469 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.953 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.512 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.003 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.143 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.518 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.105 |
| SRR2868004 | Drought Stress (root) | 25.186 |
| SRR2967015 | Control (root) | 25.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.652 |
| SRR9715740 | Leaf | 46.647 |
| SRR9715741 | Leaf | 48.132 |
| SRR9715739 | Root | 7.867 |
| SRR9715742 | Root | 16.211 |
| SRR9715743 | Root | 13.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.199 |
| SRR8749028 | MeJA induced 9h | 8.838 |
| SRR8749029 | MeJA induced 9h | 6.892 |
| SRR8749030 | Uninduced | 3.870 |
| SRR8749031 | Uninduced | 2.495 |
| SRR8749032 | Uninduced | 2.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.898 |
| SRR8400027 | Control - Root | 25.703 |