Gene detail information of Glyur000988s00029115 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56170.1 | 1.00E-42 | LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 |
| NR | XP_003598311.1 | 9.50E-93 | GPI-anchored protein LORELEI [Medicago truncatula] |
| Swissprot | tr|B3GS44|LRE_ARATH | 1.00E-47 | GPI-anchored protein LORELEI (Precursor) |
| trEMBL | tr|G7J0F7|G7J0F7_MEDTR | 4.00E-93 | Uncharacterized protein {ECO:0000313|EMBL:AFK45249.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00988 | 64999 | 68874 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.120 |
| SRR1783600 | control | 54.222 |
| SRR1783602 | moderate drought stress | 28.326 |
| SRR1811619 | moderate drought stress | 27.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.683 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.806 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.325 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.100 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 88.236 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 88.017 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.367 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.686 |
| SRR2868004 | Drought Stress (root) | 27.008 |
| SRR2967015 | Control (root) | 20.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.053 |
| SRR9715740 | Leaf | 46.521 |
| SRR9715741 | Leaf | 51.710 |
| SRR9715739 | Root | 33.641 |
| SRR9715742 | Root | 50.188 |
| SRR9715743 | Root | 43.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 137.828 |
| SRR8749028 | MeJA induced 9h | 126.816 |
| SRR8749029 | MeJA induced 9h | 179.731 |
| SRR8749030 | Uninduced | 247.932 |
| SRR8749031 | Uninduced | 136.442 |
| SRR8749032 | Uninduced | 126.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.212 |
| SRR8400027 | Control - Root | 32.377 |