Gene detail information of Glyur000988s00029114 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G55690.2 | 0 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | KHN20565.1 | 0 | SEC14 cytosolic factor [Glycine soja] |
| Swissprot | tr|Q501H5|SFH13_ARATH | 0 | Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 |
| trEMBL | tr|K7KJF8|K7KJF8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G12450.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00988 | 57062 | 62944 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000988s00029114.1 | PF03765.10 | CRAL_TRIO_N | 79 | 124 | 4.60E-08 |
| Glyur000988s00029114.1 | PF00650.15 | CRAL_TRIO | 148 | 323 | 3.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.869 |
| SRR1783600 | control | 10.920 |
| SRR1783602 | moderate drought stress | 18.107 |
| SRR1811619 | moderate drought stress | 17.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.645 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.769 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 54.204 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.641 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.911 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.297 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.316 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.929 |
| SRR2868004 | Drought Stress (root) | 32.617 |
| SRR2967015 | Control (root) | 39.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.457 |
| SRR9715740 | Leaf | 17.276 |
| SRR9715741 | Leaf | 19.817 |
| SRR9715739 | Root | 1.646 |
| SRR9715742 | Root | 7.644 |
| SRR9715743 | Root | 6.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.246 |
| SRR8749028 | MeJA induced 9h | 59.534 |
| SRR8749029 | MeJA induced 9h | 35.243 |
| SRR8749030 | Uninduced | 49.906 |
| SRR8749031 | Uninduced | 60.359 |
| SRR8749032 | Uninduced | 39.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.646 |
| SRR8400027 | Control - Root | 31.766 |