Gene detail information of Glyur000987s00026414 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52720.1 | 9.00E-17 | |
| NR | XP_007154952.1 | 5.14E-56 | hypothetical protein PHAVU_003G160900g [Phaseolus vulgaris] |
| trEMBL | tr|V7CDH6|V7CDH6_PHAVU | 2.00E-56 | Uncharacterized protein {ECO:0000313|EMBL:ESW26946.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00987 | 70608 | 70973 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.490 |
| SRR1783600 | control | 12.287 |
| SRR1783602 | moderate drought stress | 11.494 |
| SRR1811619 | moderate drought stress | 11.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 155.231 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 155.747 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.872 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.621 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 188.720 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 184.881 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 237.296 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 235.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.599 |
| SRR2868004 | Drought Stress (root) | 120.525 |
| SRR2967015 | Control (root) | 175.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1019.724 |
| SRR9715740 | Leaf | 248.196 |
| SRR9715741 | Leaf | 1016.711 |
| SRR9715739 | Root | 56.006 |
| SRR9715742 | Root | 54.105 |
| SRR9715743 | Root | 63.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 64.360 |
| SRR8749028 | MeJA induced 9h | 68.561 |
| SRR8749029 | MeJA induced 9h | 44.069 |
| SRR8749030 | Uninduced | 13.465 |
| SRR8749031 | Uninduced | 80.971 |
| SRR8749032 | Uninduced | 186.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.299 |
| SRR8400027 | Control - Root | 33.297 |