Gene detail information of Glyur000987s00026403 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19980.1 | 3.00E-125 | golgi nucleotide sugar transporter 4 |
| NR | XP_004508548.1 | 0 | PREDICTED: GDP-mannose transporter GONST4-like [Cicer arietinum] |
| Swissprot | tr|Q84L08|GONS4_ARATH | 5.00E-156 | GDP-mannose transporter GONST4 |
| trEMBL | tr|G7JU76|G7JU76_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK45112.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00987 | 14483 | 15442 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.158 |
| SRR1783600 | control | 40.964 |
| SRR1783602 | moderate drought stress | 27.613 |
| SRR1811619 | moderate drought stress | 27.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.511 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.195 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.425 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.699 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.862 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.636 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.699 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.875 |
| SRR2868004 | Drought Stress (root) | 18.416 |
| SRR2967015 | Control (root) | 19.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.336 |
| SRR9715740 | Leaf | 13.455 |
| SRR9715741 | Leaf | 14.896 |
| SRR9715739 | Root | 64.438 |
| SRR9715742 | Root | 45.558 |
| SRR9715743 | Root | 48.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.488 |
| SRR8749028 | MeJA induced 9h | 13.784 |
| SRR8749029 | MeJA induced 9h | 12.213 |
| SRR8749030 | Uninduced | 13.107 |
| SRR8749031 | Uninduced | 3.881 |
| SRR8749032 | Uninduced | 5.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.409 |
| SRR8400027 | Control - Root | 24.139 |