Gene detail information of Glyur000986s00028871 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29650.1 | 1.00E-180 | phosphate transporter 4;1 |
| NR | XP_004500238.1 | 0 | PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic-like isoform X1 [Cicer arietinum] |
| COG | YP_003588376.1 | 5.00E-56 | major facilitator superfamily protein [Kyrpidia tusciae DSM 2912] |
| Swissprot | tr|O82390|ANTR1_ARATH | 0 | Sodium-dependent phosphate transport protein 1, chloroplastic (Precursor) |
| trEMBL | tr|I1LLJ5|I1LLJ5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G26510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00986 | 33785 | 38728 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000986s00028871.1 | PF07690.11 | MFS_1 | 108 | 438 | 4.20E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.525 |
| SRR1783600 | control | 2.602 |
| SRR1783602 | moderate drought stress | 3.927 |
| SRR1811619 | moderate drought stress | 3.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.415 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.225 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.126 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.085 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.489 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.770 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.733 |
| SRR2868004 | Drought Stress (root) | 2.629 |
| SRR2967015 | Control (root) | 6.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.940 |
| SRR9715740 | Leaf | 78.545 |
| SRR9715741 | Leaf | 49.228 |
| SRR9715739 | Root | 0.858 |
| SRR9715742 | Root | 1.570 |
| SRR9715743 | Root | 1.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.754 |
| SRR8749028 | MeJA induced 9h | 1.669 |
| SRR8749029 | MeJA induced 9h | 0.424 |
| SRR8749030 | Uninduced | 0.157 |
| SRR8749031 | Uninduced | 0.065 |
| SRR8749032 | Uninduced | 0.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.482 |
| SRR8400027 | Control - Root | 2.038 |