Gene detail

Gene detail information of Glyur000986s00028870

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G29660.1	6.00E-85	zinc finger (C2H2 type) family protein
NR	XP_004500239.1	0	PREDICTED: uncharacterized protein LOC101489748 [Cicer arietinum]
trEMBL	tr\|G7ZYI5\|G7ZYI5_MEDTR	0	C2H2-like zinc finger protein {ECO:0000313\|EMBL:KEH34223.1}

Sequence

Transcript Sequence

>Glyur000986s00028870.1
ATGGCGGCATCCATTGCCACTTTCTTCAACAAGTTCTTCTATCTTCTCCTCATCCTTCTTGTCCACCTTGGCTGCTTCATCTTCACCACCACCACCACCGCGGGGAAACAAGAAAACCACCACCCTCAACCACCGTCAAAGAAACGCAAAGTCTCACCTTTATCACAGCCCTCCTCCCCTTCCCACCCCAAATTCAAAACCCACAAAGCCCTTTCTTCTTCTTGGCATTTCATCAAACACCTCTTCTCCACCAAGTCGTGCAAAACCACCAACACCACTCCCGCCACCCATTCATCACCCCAATCCACCTCCACCACCACCACCGTCACCGTCACCGCCACCGCCAGCGCCAGATCCTCCCAGCAATCCCTAATCTCCCTCGTCCAACCCAACCCCATTTCTCCGGATCCCCCACGCAGGAAGAAATCCGAATCCGACATCTCCGCCGACAACAACAACCNCTTCTTCCCACTCCGCAACGACATCTTCCCCTGCACCGCGTGCGGCGAGATCTTCCAGAAGCCCAACCTCCTCGAGCAGCATCAGGCCACAAGCCACGCCGTGTCGGAGCTCGTGNGATCCGACCCGGGACACAACATCGTACAGATCATATTCAAGTCGGGTTGGCCCGAGACCCGTGAGTTCCCACGGGTCCTCCGAATCCTGAAGATCCACAACAGCCCCAAGATCCTCTCCAGGTTCGAGGAGTACCGCGAGACAGTGAAGTCCAAGGCTGCGCGTCACGTCTCCACGCGCCGCCGCGACGAGCGGTGCATCGCCGACGGCAACGAGCTCATGCGGTTCCACTGCTCCACGTTCCTCTGNGACTTGGGACTCAACGGGGATTCCTCGATTTGTTCACAGCAATTTTGCAATATTTGCGGCNTCATAAAGTCAGGGTTCTCACCCAAGTTGGACGGAATTTCCACGCTGTCAACCAGCTGGAGGGCACACGTGTCAATCCCCGAGGACATTGAGCGTGAATTCCGCTTCATGAACGTGAAACGCGCCATGCTTGTNTGTCGGGTCATTGCGGGTCGGATCGGGTCAGATTCGGATGAGGCGGATAAAACCGACGGGGGTTTTGATTCGGTGATGGCGCGCGGAGAGAGCGGAGTTTACACCCGCCTTGATGAGGAGGAGCTGTTGGTGTTTAATCCTAGGGCTGTGCTCCCTTGCTTTGTGATTGTGTATAGTGTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00986	19840	21042	-

Gene family

Gene family	subfamily
Transcription Factors Family	C2H2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003950 NAD+ ADP-ribosyltransferase activity

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	174.649
SRR1783600	control	182.757
SRR1783602	moderate drought stress	102.297
SRR1811619	moderate drought stress	102.077

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	100.799
DRR006520	Root Summer glycyrrhizin high producing strain	96.815
DRR006521	Root Winter glycyrrhizin high producing strain	5.104
DRR006522	Root Winter glycyrrhizin high producing strain	5.027
DRR006523	Root Summer glycyrrhizin low producing strain	131.179
DRR006524	Root Summer glycyrrhizin low producing strain	131.350
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.767
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.830

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	127.992
SRR2868004	Drought Stress (root)	103.613
SRR2967015	Control (root)	104.470

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	40.575
SRR9715740	Leaf	21.790
SRR9715741	Leaf	31.698
SRR9715739	Root	83.242
SRR9715742	Root	100.965
SRR9715743	Root	90.052

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	26.244
SRR8749028	MeJA induced 9h	21.777
SRR8749029	MeJA induced 9h	19.437
SRR8749030	Uninduced	6.120
SRR8749031	Uninduced	5.106
SRR8749032	Uninduced	5.901

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	78.751
SRR8400027	Control - Root	105.596