Gene detail information of Glyur000986s00028868 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07290.1 | 4.00E-135 | golgi nucleotide sugar transporter 2 |
| NR | KHN06257.1 | 0 | GDP-mannose transporter GONST2 [Glycine soja] |
| Swissprot | tr|Q84L09|GONS2_ARATH | 4.00E-179 | GDP-mannose transporter GONST2 |
| trEMBL | tr|K7MQB6|K7MQB6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G07345.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00986 | 11721 | 15625 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000986s00028868.1 | PF03151.11 | TPT | 312 | 445 | 1.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.694 |
| SRR1783600 | control | 1.880 |
| SRR1783602 | moderate drought stress | 2.534 |
| SRR1811619 | moderate drought stress | 2.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.978 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.891 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.584 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.635 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.254 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.168 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.041 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.353 |
| SRR2868004 | Drought Stress (root) | 5.830 |
| SRR2967015 | Control (root) | 6.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.795 |
| SRR9715740 | Leaf | 0.606 |
| SRR9715741 | Leaf | 1.216 |
| SRR9715739 | Root | 0.515 |
| SRR9715742 | Root | 1.409 |
| SRR9715743 | Root | 1.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.938 |
| SRR8749028 | MeJA induced 9h | 10.339 |
| SRR8749029 | MeJA induced 9h | 3.368 |
| SRR8749030 | Uninduced | 2.370 |
| SRR8749031 | Uninduced | 0.786 |
| SRR8749032 | Uninduced | 0.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.709 |
| SRR8400027 | Control - Root | 4.489 |