Gene detail information of Glyur000986s00028866 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29670.1 | 2.00E-33 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | KHN06259.1 | 2.39E-45 | hypothetical protein glysoja_030325 [Glycine soja] |
| COG | YP_867198.1 | 1.00E-08 | hypothetical protein Mmc1_3303 [Magnetococcus marinus MC-1] |
| trEMBL | tr|I1N026|I1N026_SOYBN | 1.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G07380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00986 | 583 | 834 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 622.378 |
| SRR1783600 | control | 632.539 |
| SRR1783602 | moderate drought stress | 852.815 |
| SRR1811619 | moderate drought stress | 862.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 412.348 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 403.796 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 166.367 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 165.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 323.582 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 330.585 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 630.076 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 624.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.734 |
| SRR2868004 | Drought Stress (root) | 20.285 |
| SRR2967015 | Control (root) | 36.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 292.708 |
| SRR9715740 | Leaf | 293.390 |
| SRR9715741 | Leaf | 265.660 |
| SRR9715739 | Root | 161.146 |
| SRR9715742 | Root | 159.525 |
| SRR9715743 | Root | 147.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 102.651 |
| SRR8749028 | MeJA induced 9h | 97.760 |
| SRR8749029 | MeJA induced 9h | 136.871 |
| SRR8749030 | Uninduced | 189.824 |
| SRR8749031 | Uninduced | 65.910 |
| SRR8749032 | Uninduced | 112.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 138.232 |
| SRR8400027 | Control - Root | 159.788 |